Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_D22
         (476 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    43   1e-04
AF039716-9|AAB96734.2|  548|Caenorhabditis elegans Hypothetical ...    37   0.009
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    35   0.026
Z81114-4|CAB03288.2|  688|Caenorhabditis elegans Hypothetical pr...    29   1.3  
AY652944-1|AAT73711.1|  688|Caenorhabditis elegans guanylate cyc...    29   1.3  
AF016427-1|AAB65351.1|  594|Caenorhabditis elegans Hypothetical ...    29   1.3  
AC006661-5|AAF39890.2|  488|Caenorhabditis elegans Hypothetical ...    28   3.0  
AC006661-4|ABB88208.1|  561|Caenorhabditis elegans Hypothetical ...    28   3.0  
AL032626-2|CAA21539.1|  571|Caenorhabditis elegans Hypothetical ...    28   4.0  
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
 Frame = +2

Query: 149 GGSLIHPSAVLTAAHNVAKTQELRARAGEWDTQNIKEIFPYQDREVESVVVHKDFN-GGN 325
           GGSLI P+ VLTAAH  AK +   + +            P++   V +V +H  +N G  
Sbjct: 85  GGSLIDPNFVLTAAHCFAKDRRPTSYSVRVGGHRSGSGSPHR---VTAVSIHPWYNIGFP 141

Query: 326 LFYDVGILFLKSPMELTPNVGLACLPPYEEKAKNGARCFATGWG 457
             YD  I+ +  P+  +      CLP     A     C  TGWG
Sbjct: 142 SSYDFAIMRIHPPVNTSTTARPICLPSL--PAVENRLCVVTGWG 183


>AF039716-9|AAB96734.2|  548|Caenorhabditis elegans Hypothetical
           protein W03G9.7 protein.
          Length = 548

 Score = 36.7 bits (81), Expect = 0.009
 Identities = 22/79 (27%), Positives = 35/79 (44%)
 Frame = +2

Query: 230 GEWDTQNIKEIFPYQDREVESVVVHKDFNGGNLFYDVGILFLKSPMELTPNVGLACLPPY 409
           G+WD + +KE   Y+D  V    V K+ N   + YD  +   +   + T N+       Y
Sbjct: 151 GQWDDRYLKEKAEYEDAMVRQETVQKELNIARVNYDNAVKIQEIYKQQTDNLNAL----Y 206

Query: 410 EEKAKNGARCFATGWGKDK 466
           EE+ K     F T +  +K
Sbjct: 207 EEQDKMLEAIFGTDYASEK 225


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 35.1 bits (77), Expect = 0.026
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
 Frame = +2

Query: 149 GGSLIHPSAVLTAAHNVAKTQELRAR---AGEWD---TQNIKEIFPYQDREVESVVVHKD 310
           G S++  + ++TAAH   + + + +     G+WD   T   ++IF  Q   +    ++KD
Sbjct: 55  GASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQIFYLQ--RIHFYPLYKD 112

Query: 311 FNGGNLFYDVGILFLKSP-MELTPNVGLACLPPYEEKAKNGARCFATGWG 457
                  +D+ IL +  P +E        CLP  +     G +C  +GWG
Sbjct: 113 I----FSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCVVSGWG 158


>Z81114-4|CAB03288.2|  688|Caenorhabditis elegans Hypothetical
           protein T04D3.4 protein.
          Length = 688

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 100 RFDLQNGHHPREFSEFGLAVPLSCCFEPNTF 8
           + DL  G +    S+F LA P   CF+P+ F
Sbjct: 208 QIDLSTGIYEISSSDFSLAFPYHICFDPDLF 238


>AY652944-1|AAT73711.1|  688|Caenorhabditis elegans guanylate
           cyclase-like protein protein.
          Length = 688

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 100 RFDLQNGHHPREFSEFGLAVPLSCCFEPNTF 8
           + DL  G +    S+F LA P   CF+P+ F
Sbjct: 208 QIDLSTGIYEISSSDFSLAFPYHICFDPDLF 238


>AF016427-1|AAB65351.1|  594|Caenorhabditis elegans Hypothetical
           protein F32D1.1 protein.
          Length = 594

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 15/29 (51%), Positives = 18/29 (62%)
 Frame = +1

Query: 148 RRIPDTPERCSHRSA*RRKDPGVAREGGG 234
           RR PD P+RCS+     RK  G+  EGGG
Sbjct: 251 RRAPDIPKRCSNPLI--RKAMGMDTEGGG 277


>AC006661-5|AAF39890.2|  488|Caenorhabditis elegans Hypothetical
           protein H20J04.4a protein.
          Length = 488

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 116 PDGLKLNVYVGGGSLIHPSAVLT-AAHNVAKTQELRARAGEWDTQNIKEIF 265
           P  LK +V VGG SLIH +  L+   H V  T    A   E D   I ++F
Sbjct: 183 PITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVF 233


>AC006661-4|ABB88208.1|  561|Caenorhabditis elegans Hypothetical
           protein H20J04.4b protein.
          Length = 561

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +2

Query: 116 PDGLKLNVYVGGGSLIHPSAVLT-AAHNVAKTQELRARAGEWDTQNIKEIF 265
           P  LK +V VGG SLIH +  L+   H V  T    A   E D   I ++F
Sbjct: 183 PITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVF 233


>AL032626-2|CAA21539.1|  571|Caenorhabditis elegans Hypothetical
           protein Y37D8A.2 protein.
          Length = 571

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 213 SWVFATLCAAVRTALGCIRDPPPTYTFSFRPSG 115
           +W+F  L AAV  A+GC      TYT   +P G
Sbjct: 2   NWIFIFLAAAV--AIGCEARQERTYTVCQKPEG 32


>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
            F54E4.1 protein.
          Length = 2948

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 9/22 (40%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
 Frame = -1

Query: 89   SKW-PPSKGILRIWSRRPSLLL 27
            SKW PP K I+++++ +PS+++
Sbjct: 2407 SKWVPPQKNIVQLFAEKPSVMM 2428


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,990,602
Number of Sequences: 27780
Number of extensions: 257628
Number of successful extensions: 681
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)