Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_D17
(351 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 29 0.94
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 28 1.6
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 27 3.8
AC006674-12|AAO38617.1| 357|Caenorhabditis elegans Hypothetical... 27 3.8
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 27 5.0
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 27 5.0
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 5.0
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 27 5.0
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 27 5.0
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 5.0
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 26 6.6
AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical ... 26 6.6
AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical... 26 8.7
AF016425-10|AAB65334.2| 336|Caenorhabditis elegans Serpentine r... 26 8.7
AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical ... 26 8.7
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 29.1 bits (62), Expect = 0.94
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 140 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 256
V A P P F+ P+ P PI GPAF P P
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAP 148
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 140 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 256
V A P P F+ P+ P P+ GPAF P P
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAFAYAPSPVLAP 161
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +2
Query: 98 DNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPA 223
D SG P G DP +QPS GP G + P P+
Sbjct: 291 DPSGAPPSGGPPGPF----DPSGAQPSGGPPGPFNPSGAPPS 328
>AC006674-12|AAO38617.1| 357|Caenorhabditis elegans Hypothetical
protein K12H6.6b protein.
Length = 357
Score = 27.1 bits (57), Expect = 3.8
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 128 YCRPMEHHYCPPRELCLRQPWP 63
+C P+++ Y P + L PWP
Sbjct: 282 HCSPLQYPYSNPYSILLDAPWP 303
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 223 VRRFQSSQLSTQAIRRPSRP 282
+RR+QSS+++ +A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 223 VRRFQSSQLSTQAIRRPSRP 282
+RR+QSS+++ +A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 223 VRRFQSSQLSTQAIRRPSRP 282
+RR+QSS+++ +A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 223 VRRFQSSQLSTQAIRRPSRP 282
+RR+QSS+++ +A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 223 VRRFQSSQLSTQAIRRPSRP 282
+RR+QSS+++ +A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 223 VRRFQSSQLSTQAIRRPSRP 282
+RR+QSS+++ +A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 223 VRRFQSSQLSTQAIRRPSRP 282
+RR+QSS+++ +A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 223 VRRFQSSQLSTQAIRRPSRP 282
+RR+QSS+++ +A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 223 VRRFQSSQLSTQAIRRPSRP 282
+RR+QSS+++ +A RR RP
Sbjct: 30 LRRWQSSEMNAEAARRTKRP 49
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 152 PDPFFSQPSNGPSGNYEPIS 211
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 152 PDPFFSQPSNGPSGNYEPIS 211
P PF S P P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 149 NPDPFFSQPS-NGPSGNYEPISTGPAFVDFNHPNYPPK 259
NP P PS NGPS +P GP+ N P+ P K
Sbjct: 939 NPGPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNK 976
>AF003386-6|AAK82897.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.4a protein.
Length = 527
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 122 GNSDHVVIANPDPFFSQPSNGPSG 193
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSGG 499
>AL110477-20|CAB76740.3| 728|Caenorhabditis elegans Hypothetical
protein Y113G7B.18 protein.
Length = 728
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 308 QHETFTSHHGREGRRIAW 255
Q ETFT H G+ R++ W
Sbjct: 52 QPETFTDHVGKLARKVEW 69
>AF016425-10|AAB65334.2| 336|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 13 protein.
Length = 336
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 316 SLINMRHLLPTTGERVVVSLGWIIGMIEIDERRS 215
++I M H +P G V +++ W + I+ ++RR+
Sbjct: 279 AIIEMTHAIPLYGMIVCIAVYWKLRTIDGEQRRN 312
>AF003386-2|AAB54255.1| 527|Caenorhabditis elegans Hypothetical
protein F59E12.5a protein.
Length = 527
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 122 GNSDHVVIANPDPFFSQPSNGPSG 193
GN D VI N DPF S G G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSRG 499
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,163,171
Number of Sequences: 27780
Number of extensions: 167224
Number of successful extensions: 534
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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