Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_D16
(534 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 32 0.25
09_04_0518 - 18261420-18261953,18262054-18262626,18262736-182629... 29 1.8
04_03_0895 + 20633554-20634480 29 1.8
12_02_0841 + 23579344-23579394,23579522-23579584,23579717-235798... 29 2.4
10_07_0033 + 12152655-12152906,12153203-12153432,12154126-121541... 29 2.4
03_03_0256 + 15898702-15900420 29 3.1
01_06_1034 + 33962813-33963802 29 3.1
11_06_0610 - 25449085-25453284 28 4.1
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 28 4.1
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 28 4.1
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 28 5.4
04_04_0929 - 29474540-29475247,29475485-29475850,29476032-294760... 28 5.4
12_01_0436 - 3436886-3437559,3438738-3438924 27 7.2
02_05_1074 - 33904518-33904697,33904886-33904985,33905085-339053... 27 7.2
12_01_0411 + 3276679-3276687,3277430-3277493,3278256-3278297,327... 27 9.5
01_06_0355 + 28657833-28660665,28660762-28661126 27 9.5
01_01_0393 + 3025813-3026399,3026493-3027081 27 9.5
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 32.3 bits (70), Expect = 0.25
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +3
Query: 108 SPHRCLRPWSGQTEQAPEDQAPDPNNPLRAGATRSNGQRNP 230
SP R P Q PE Q P P NP++AGA S+ Q+NP
Sbjct: 1947 SPAREPSPNPVQAGAPPEQQNPTPPNPVQAGA--SSEQQNP 1985
>09_04_0518 -
18261420-18261953,18262054-18262626,18262736-18262948,
18263379-18263510,18263591-18263731,18263899-18264120
Length = 604
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 448 SFIWFIHSSMTARISSTVISGKVMDESGWKH 356
SFI ++ M RI S V+SGK+ +E KH
Sbjct: 71 SFIKNLYEEMRERIDSAVMSGKIPEEIKLKH 101
>04_03_0895 + 20633554-20634480
Length = 308
Score = 29.5 bits (63), Expect = 1.8
Identities = 36/140 (25%), Positives = 53/140 (37%), Gaps = 18/140 (12%)
Frame = +3
Query: 99 ILVSPHRCLRPWSGQTEQAPEDQAPDPNNPLRAGATRSNGQRNPN-----YEST----YV 251
+ + H +P SG A + QA P +A A R Q P Y+++ +
Sbjct: 39 VRMESHAIKKPSSGAAAAAAQAQAHQL--PAQAQARREQQQPPPRAPVIIYDASPKIIHA 96
Query: 252 FPNDFPALLERV-------PGPPEGDNLLFQSGPAKGTCRVMCFHPDSSMTLP--LMTVD 404
PN+F AL++R+ P PP Q P F P + P M+
Sbjct: 97 KPNEFMALVQRLTGPGSGPPAPPHQGEAQAQDYPMMDEAAAQQFFPPELLLSPSAAMSPA 156
Query: 405 EILAVIEEWINQMKELGRKY 464
LA IE + M E +Y
Sbjct: 157 ARLATIERSVRPMPEPAPEY 176
>12_02_0841 +
23579344-23579394,23579522-23579584,23579717-23579826,
23580220-23580320,23580816-23580877,23580972-23581112,
23581388-23581523,23582257-23582284,23582665-23582728,
23582924-23583044,23583565-23583623,23583716-23583784,
23583875-23584015,23584130-23584194,23584345-23584441,
23584803-23584862,23585409-23585561,23586022-23586088,
23586174-23586284,23586689-23586799,23587370-23587567,
23587679-23587860
Length = 729
Score = 29.1 bits (62), Expect = 2.4
Identities = 25/97 (25%), Positives = 38/97 (39%)
Frame = -2
Query: 512 RASHDGALVLKYLNPCVFSTEFFHLVYPFFNDRQDFVDSHQW*GHGRVRVEAHYSASSFS 333
R S D L+ V S + ++P D++ H+W + S
Sbjct: 467 RTSEDALSALENTLYDVVSRYSYMDLWPCSTKELDYLSRHEWLAKN-IANRGDKSVVLTG 525
Query: 332 GTRLK*KIVSLRRARNSFQ*RGKVVREDISRLVIRIP 222
G L + + + SF KVVR +ISR+VI P
Sbjct: 526 GATLDKGDIRVGSNKKSFPQSSKVVRPEISRMVIYDP 562
>10_07_0033 +
12152655-12152906,12153203-12153432,12154126-12154195,
12154945-12154968
Length = 191
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = -1
Query: 327 PIEIEDCLPQEGPELFPVTRESRSGRHKSTRNSDSFVHWSGWHQ 196
P+ + + +GP+L+ + E+RSGR + + + + ++G H+
Sbjct: 110 PVRNQLGMHPDGPKLYTIASEARSGRVPARADREHLMTYTGEHE 153
>03_03_0256 + 15898702-15900420
Length = 572
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 78 NPLKDEWILVSPHRCLRPWSGQTEQAPEDQAPDPNNPLRAGATR 209
NP DEWIL + PW+G+ E P + + A A +
Sbjct: 178 NPASDEWILRNKQ---SPWAGKKEAPPAELTEEQRQYAEAHAAK 218
>01_06_1034 + 33962813-33963802
Length = 329
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 120 CLRPWSGQTEQAPEDQAPDPNNPLRAGATRSN 215
C+ PW Q P + P P++ R+G+TRS+
Sbjct: 218 CIIPWLVQHNSCPVCRHPLPSSSHRSGSTRSS 249
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 156 PEDQAPDPNNPLRAGATRSNGQRNPNYESTYVFP--NDFPALLERVPGPPEG 305
PE+++P P++P ++ + ++ P E + P P E+ P PP G
Sbjct: 776 PEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSG 827
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 160 KTKLRTLITHYELVPPAPMDKGIRITSRL 246
+ LR L T E+V P+P G+R++SR+
Sbjct: 979 ENNLRALETAAEVVVPSPAGTGLRVSSRI 1007
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +3
Query: 138 GQTEQAPEDQAPDPNNPLRAGATRSNGQRNPNYESTY 248
G P AP PN P GA G P+Y+ Y
Sbjct: 346 GPGSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGY 382
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 409 ISSTVISGKVMDESGWKHITLQVPLAGPD*NRR 311
+S T + G + DE+G++H + AG N R
Sbjct: 199 VSGTKVGGTIFDETGYRHTAADLLAAGDPNNLR 231
>04_04_0929 -
29474540-29475247,29475485-29475850,29476032-29476093,
29476191-29476302,29476401-29476529,29476724-29476738
Length = 463
Score = 27.9 bits (59), Expect = 5.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 493 PWFSNI*THVYFLPSSFIWFIHSSM 419
PW +N +Y+LP+ I+ +HS++
Sbjct: 307 PWLTNTQQFLYYLPNGQIFSVHSAL 331
>12_01_0436 - 3436886-3437559,3438738-3438924
Length = 286
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 132 WSGQTEQAPEDQAPDPNNPLRAGATRSNGQRNP 230
WS +E A AP P P AG S GQ +P
Sbjct: 41 WSYCSELAAAAAAPSPAAPFPAGYVPSPGQHSP 73
>02_05_1074 -
33904518-33904697,33904886-33904985,33905085-33905311,
33905511-33908384,33908467-33908643,33908786-33909008,
33909727-33909806,33910657-33910817,33910892-33910937,
33911129-33911251,33911730-33911804,33911920-33912120
Length = 1488
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 200 CHPLQWTKESELRVDLCLPERLSRV 274
CHP+QW K S +R + E + V
Sbjct: 834 CHPVQWVKRSAVRFVVACSESIGPV 858
>12_01_0411 +
3276679-3276687,3277430-3277493,3278256-3278297,
3279047-3279063,3280011-3281258
Length = 459
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 225 NPNYESTYVFPNDFPALLERVPGPPEGDNLLFQSGPAK 338
N N + FP DFP +L+ P D LL S +K
Sbjct: 164 NNNVVHLHDFPRDFPQVLDTWTRPVHCDGLLLVSNMSK 201
>01_06_0355 + 28657833-28660665,28660762-28661126
Length = 1065
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 33 TNMDFKPKEHQHVRYNPLKDEWILVSPHRCL 125
+N+DFK Q++ L DEW+L S CL
Sbjct: 838 SNLDFKALVLQYMPNGSL-DEWLLYSDRHCL 867
>01_01_0393 + 3025813-3026399,3026493-3027081
Length = 391
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 249 HKSTRNSDSFVHWSGWHQLVMGY 181
H T++ F+HW HQ+ +G+
Sbjct: 276 HHRTQDEPPFLHWDARHQVAIGH 298
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,449,433
Number of Sequences: 37544
Number of extensions: 372672
Number of successful extensions: 1011
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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