Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_D11
         (524 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      27   0.12 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.5  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    22   4.4  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   7.7  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   7.7  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    21   7.7  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   7.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.7  

>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +1

Query: 367 DLVPDAGHRDLPTSSSHYHPH 429
           DL     HRDLP   SH+H H
Sbjct: 57  DLSSPPEHRDLPIYQSHHHLH 77


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 230  YIMSDLLKRFDYETTNDFV 286
            Y +  L   FD+++TNDFV
Sbjct: 1592 YSVRGLCGNFDHDSTNDFV 1610


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 391 RDLPTSSSHYHPH 429
           RD   SS+H HPH
Sbjct: 637 RDASLSSTHSHPH 649


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = -2

Query: 427 EDDNDCWK*EGHDDRRQEPGQPQTVLCVHIFQIKKSN 317
           EDD+D    +  DD     G+P   +   +F +++++
Sbjct: 391 EDDDDDGDDDDDDDVEAANGKPAEGMLTDVFHVQETD 427


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 293 AISIAGFYVGLFYLEYVDTE 352
           A +I+ ++VG  Y   +DT+
Sbjct: 103 ADTISSYFVGKMYFNLIDTK 122


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 293 AISIAGFYVGLFYLEYVDTE 352
           A +I+ ++VG  Y   +DT+
Sbjct: 108 ADTISSYFVGKMYFNLIDTK 127


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 131 DNPTDREIGTNNNLHSYN 78
           +NP       NNN ++YN
Sbjct: 85  NNPLSNNYNYNNNYNNYN 102


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 293 AISIAGFYVGLFYLEYVDTE 352
           A +I+ ++VG  Y   +DT+
Sbjct: 108 ADTISSYFVGKMYFNLIDTK 127


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -2

Query: 400 EGHDDRRQEPGQP 362
           EGHDDR Q    P
Sbjct: 59  EGHDDREQPSVYP 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,792
Number of Sequences: 438
Number of extensions: 2379
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)