Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_D09
         (114 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   0.79 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   4.2  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    19   5.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    18   9.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    18   9.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    18   9.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    18   9.7  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.8 bits (44), Expect = 0.79
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 46  SSPYWPWLPQTEFTWWTIVV 105
           S+P W + P   FTW  I V
Sbjct: 549 SAPVWRFQPWGPFTWGGIGV 568


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 5/18 (27%), Positives = 9/18 (50%)
 Frame = +1

Query: 46  SSPYWPWLPQTEFTWWTI 99
           S P + W  + E  W+ +
Sbjct: 258 SHPTYDWFEKLELKWFAV 275


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +2

Query: 14  LFDNESFRVFLLRRIGHGCRKQSSR 88
           L  +ESFR    R     CRK+  +
Sbjct: 433 LAGDESFRKRRQREAAGNCRKRGEK 457


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/8 (62%), Positives = 5/8 (62%)
 Frame = +1

Query: 52  PYWPWLPQ 75
           PYW W  Q
Sbjct: 838 PYWNWSNQ 845


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 71  GSHGQYGEE 45
           GS+G+YG E
Sbjct: 148 GSYGEYGIE 156


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl
          cyclase alpha 1 subunit protein.
          Length = 699

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 65 GCRKQSSRG 91
          GC +Q+SRG
Sbjct: 13 GCDEQTSRG 21


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 71  GSHGQYGEE 45
           GS+G+YG E
Sbjct: 238 GSYGEYGIE 246


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,175
Number of Sequences: 438
Number of extensions: 413
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 18
effective length of database: 138,459
effective search space used:  2630721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)