Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_D06
         (488 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM183303-1|CAJ66088.1|  418|Homo sapiens autogenous vein graft r...    33   0.53 
AK126884-1|BAC86735.1|  175|Homo sapiens protein ( Homo sapiens ...    33   0.53 
BC093850-1|AAH93850.1|  160|Homo sapiens C18orf23 protein protein.     31   2.1  
AK091537-1|BAC03687.1|  160|Homo sapiens protein ( Homo sapiens ...    31   2.1  
AK124784-1|BAC85948.1|  218|Homo sapiens protein ( Homo sapiens ...    30   3.7  
AK127601-1|BAC87052.1|  415|Homo sapiens protein ( Homo sapiens ...    30   4.9  

>AM183303-1|CAJ66088.1|  418|Homo sapiens autogenous vein graft
           remodeling associated protein 2 protein.
          Length = 418

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +1

Query: 70  VYLCIVCVCAYLCVHVYSAARRSSNVFFILSQQN 171
           V  C+VCVC  +CV V++ ARR     ++  + N
Sbjct: 350 VCACVVCVCVCVCVCVHARARRHRGTEYLWLEDN 383


>AK126884-1|BAC86735.1|  175|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44936 fis, clone BRAMY3018121. ).
          Length = 175

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -2

Query: 184 HWCSHFAEIE*KRRC-STCEPHYTRAHTNMHTHTL-YTNIH 68
           H C+H       R C  TC    T  HT+MHTHTL YT+IH
Sbjct: 6   HTCTHTHTHAHIRTCIHTC----TDTHTHMHTHTLTYTHIH 42


>BC093850-1|AAH93850.1|  160|Homo sapiens C18orf23 protein protein.
          Length = 160

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 79  CI-VCVCAYLCVHVYSAARRSSNV 147
           C+ VCVC Y+CVHV   AR    V
Sbjct: 58  CVCVCVCLYVCVHVCECARAPRRV 81


>AK091537-1|BAC03687.1|  160|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34218 fis, clone FCBBF3022311. ).
          Length = 160

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 79  CI-VCVCAYLCVHVYSAARRSSNV 147
           C+ VCVC Y+CVHV   AR    V
Sbjct: 58  CVCVCVCLYVCVHVCECARAPRRV 81


>AK124784-1|BAC85948.1|  218|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42794 fis, clone BRAWH3007783. ).
          Length = 218

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 142 CSTCEPHYTRAHTNMHTHTLYTNIHQ 65
           C+T   H T+AHT  HT T +T  H+
Sbjct: 134 CTTHHRHTTQAHTQAHTCTHHTGTHR 159


>AK127601-1|BAC87052.1|  415|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45698 fis, clone FEBRA2017811. ).
          Length = 415

 Score = 29.9 bits (64), Expect = 4.9
 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = -2

Query: 127 PHYTRAHTNMHTHTL-YTNIH 68
           P +TR +T+MHTHTL  T IH
Sbjct: 196 PTHTRTYTHMHTHTLTCTQIH 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,226,003
Number of Sequences: 237096
Number of extensions: 1430419
Number of successful extensions: 6213
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6068
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)