Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_D02
(596 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 54 5e-09
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 51 3e-08
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 44 3e-06
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 44 5e-06
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 43 9e-06
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 42 2e-05
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 41 3e-05
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 40 5e-05
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 40 6e-05
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 39 1e-04
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 39 1e-04
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 39 1e-04
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 38 2e-04
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 38 3e-04
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 36 8e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 35 0.002
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 32 0.016
AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse t... 26 1.1
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 25 1.9
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 53.6 bits (123), Expect = 5e-09
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = +2
Query: 11 KDYLNDRYQCVKIDDITSEDALLTFGVTQGSILGPTLFLIYINDLCTLDLPHCKILTYAD 190
K YL R VKID S++ + + GV QGS +GP LF+++IND+ TL LP I +AD
Sbjct: 717 KSYLIHRTYIVKIDKHMSKEIVSSSGVPQGSNIGPLLFILFINDV-TLALPPDSISLFAD 775
Query: 191 DTAL 202
D +
Sbjct: 776 DAKI 779
Score = 28.7 bits (61), Expect = 0.15
Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 438 KYLGVLIDXVLSWHEQINSVVLRIRKMI-YIFKNLRSSLNLVTLRVVYFALTQS 596
K LGVL+D L++ + I+ VV R +++ + + N + ++ VY + +S
Sbjct: 845 KDLGVLLDSSLNFKQHIDDVVARGNQLLGVVIRTTNEFRNPMCIKAVYNCIVRS 898
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 50.8 bits (116), Expect = 3e-08
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = +2
Query: 17 YLNDRYQCVKIDDITSEDALLTFGVTQGSILGPTLFLIYINDLCTLDLPHCKILTYADDT 196
YL++R VK SE+ T GV QG +L P LF ++IND+C + LP L YADD
Sbjct: 648 YLSNRSCRVKTGSYLSEEFFCTSGVPQGCVLSPLLFSLFINDVCNV-LPPDGHLLYADDI 706
Query: 197 ALII 208
+ +
Sbjct: 707 KIFL 710
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 44.4 bits (100), Expect = 3e-06
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 77 LTFGVTQGSILGPTLFLIYINDLCTLDL-PHCKILTYADDTALII 208
LT GV QGSILGPTL+ + N + TL L P +++ +ADD AL +
Sbjct: 597 LTAGVPQGSILGPTLWNVMYNGVLTLGLPPGPEVIGFADDIALTV 641
Score = 24.6 bits (51), Expect = 2.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +3
Query: 435 IKYLGVLIDXVLSWHEQI----NSVVLRIRKMIYIFKNL 539
+KYLGV+ID LS+ + + N+V +I I N+
Sbjct: 705 LKYLGVIIDDRLSFRKHVEYACNNVFKAAISLIQIMPNI 743
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 43.6 bits (98), Expect = 5e-06
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +2
Query: 2 EVFKDYLNDRYQCVKIDDITSEDALLTFGVTQGSILGPTLF-LIYINDLCTLDLPHCKIL 178
++ DY +R D +E A+ T GV QGS+LGPTL+ L+Y L + +I+
Sbjct: 577 DIIGDYFRNRVLMYDTTDGPAEIAV-TSGVPQGSVLGPTLWNLMYDGVLRVAMVEGARII 635
Query: 179 TYADDTALIID 211
YADD L+++
Sbjct: 636 GYADDIVLLVE 646
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 42.7 bits (96), Expect = 9e-06
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +2
Query: 77 LTFGVTQGSILGPTLFLIYINDLCTLDLPH-CKILTYADDTALII 208
+T GV QGSILGPTL+ + + + LP C+++ YADD L+I
Sbjct: 689 ITAGVPQGSILGPTLWNTMYDGVLDVALPQDCEMVAYADDLVLLI 733
Score = 26.6 bits (56), Expect = 0.61
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 435 IKYLGVLIDXVLSWHEQINSVVLRIRKM 518
++YLGV + LSW + V R RK+
Sbjct: 797 MRYLGVTLHDHLSWLPHVREVTTRARKI 824
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 41.9 bits (94), Expect = 2e-05
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Frame = +2
Query: 77 LTFGVTQGSILGPTLFLIYINDLCTLDL-PHCKILTYADDTALII 208
+T GV QGSILGPTL+ I + + + L P +++ YADD AL++
Sbjct: 682 VTAGVPQGSILGPTLWNIMYDGVLDVPLPPDVEVIGYADDLALLV 726
Score = 23.4 bits (48), Expect = 5.7
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +3
Query: 435 IKYLGVLIDXVLSWHEQINSVVLRIRKMI 521
I+YLGV + L W + + V + +++
Sbjct: 790 IRYLGVQLQDHLKWRDHVTKVSEKASRVV 818
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 41.1 bits (92), Expect = 3e-05
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +2
Query: 86 GVTQGSILGPTLFLIYINDLCTLDLPH-CKILTYADDTALI 205
GVTQGSILGPTL+ I + + ++LP I+ +ADD A++
Sbjct: 634 GVTQGSILGPTLWNIMYDGVLAVELPEGASIVGFADDLAIL 674
Score = 25.0 bits (52), Expect = 1.9
Identities = 9/35 (25%), Positives = 19/35 (54%)
Frame = +3
Query: 435 IKYLGVLIDXVLSWHEQINSVVLRIRKMIYIFKNL 539
I+YLGV++ LSW + V + +++ + +
Sbjct: 740 IRYLGVMLHDHLSWRPHVEMVADKALRVVRALRGI 774
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 40.3 bits (90), Expect = 5e-05
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 EVFKDYLNDRYQCVKIDDITSEDALLTFGVTQGSILGPTLFLIYINDLCTLDLPH-CKIL 178
++ + ++ DR DD L T GV QGSILGPTL+ + + + + LP +I+
Sbjct: 618 KLLQHWMTDRQLVFDTDDGPVTRNLST-GVPQGSILGPTLWNVMYDSVLDVQLPEGAEII 676
Query: 179 TYADDTALI 205
+ADD L+
Sbjct: 677 AFADDLLLL 685
Score = 26.6 bits (56), Expect = 0.61
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 435 IKYLGVLIDXVLSWHEQI 488
I+YLGV+ID LSW +
Sbjct: 751 IRYLGVVIDNQLSWKSHV 768
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 39.9 bits (89), Expect = 6e-05
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +2
Query: 77 LTFGVTQGSILGPTLFLIYINDLCTLDL-PHCKILTYADDTALII 208
+T GV QGSILGPTL+ + + + L P +IL YADD L++
Sbjct: 622 VTAGVPQGSILGPTLWNTMYDGVLDIALPPDAEILGYADDLVLLV 666
Score = 25.0 bits (52), Expect = 1.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 435 IKYLGVLIDXVLSWHEQINSVVLRIRKM 518
I+YLGV + LSW + V R K+
Sbjct: 730 IRYLGVTLQDKLSWLPHVKEVTERAGKI 757
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 39.1 bits (87), Expect = 1e-04
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 77 LTFGVTQGSILGPTLFLIYINDLCTLDLPH-CKILTYADDTALI 205
+T GV QGSILGPTL+ I + + ++LP ++ YADD ++
Sbjct: 628 VTAGVPQGSILGPTLWNIMYDGVLRVELPEGASVIGYADDIVVM 671
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 38.7 bits (86), Expect = 1e-04
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2
Query: 2 EVFKDYLNDRYQCVKIDDITSEDALLTFGVTQGSILGPTLFLIYINDLCTLDL-PHCKIL 178
++ +Y +R + ++ + + ++T GV QGS+LGPTL+ + N++ L L ++
Sbjct: 582 DIIGNYFRNRVLLYETNE-GNRERVVTAGVPQGSVLGPTLWNLMYNEVLGLTLYDGASLI 640
Query: 179 TYADDTALI 205
+ADD L+
Sbjct: 641 GFADDIVLV 649
Score = 23.8 bits (49), Expect(2) = 0.60
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 435 IKYLGVLIDXVLSWHEQINSVVLR 506
+KYLG++ID L + + I V R
Sbjct: 714 LKYLGIMIDDRLEYTQHIKYVAER 737
Score = 21.0 bits (42), Expect(2) = 0.60
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +3
Query: 255 VIMNWLSTNLLTLNVKKSSFV 317
+I W+ + L LN+ K+ ++
Sbjct: 668 IIRQWMESVELQLNISKTEYI 688
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 38.7 bits (86), Expect = 1e-04
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 86 GVTQGSILGPTLFLIYINDLCTLDLP-HCKILTYADDTALI 205
GV QGSILGPTL+ + + + + LP K++ YADD ++
Sbjct: 644 GVPQGSILGPTLWNVMYDGVLRIPLPDEAKVIGYADDLVVL 684
Score = 25.4 bits (53), Expect = 1.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 435 IKYLGVLIDXVLSWHEQINSVVLR 506
IK+LGVL+ LSW + +V R
Sbjct: 750 IKHLGVLVHDHLSWIPHVTAVTQR 773
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 37.9 bits (84), Expect = 2e-04
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +2
Query: 86 GVTQGSILGPTLFLIYINDLCTLDLPH-CKILTYADDTALII 208
GV QGS+LG TL+ + + + TL LPH +I +ADD A+ +
Sbjct: 661 GVPQGSVLGLTLWNVIYDGVLTLALPHGVEITGFADDIAITV 702
Score = 24.2 bits (50), Expect = 3.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 435 IKYLGVLIDXVLSWHEQINSVVLRIRKMI 521
+KYLGV+ID L + + ++ K I
Sbjct: 766 LKYLGVVIDDRLKFKSHLEEACKKVMKAI 794
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 37.5 bits (83), Expect = 3e-04
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +2
Query: 77 LTFGVTQGSILGPTLFLIYINDLCTLDLP-HCKILTYADDTALII 208
++ GV QGSILGPTL+ + + + + LP +I+ YADD L++
Sbjct: 697 ISAGVPQGSILGPTLWNMMYDGVFGVGLPLGAEIIGYADDLVLLV 741
Score = 30.7 bits (66), Expect = 0.037
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 435 IKYLGVLIDXVLSWHEQINSVVLRIRKMIYIFKNLRSSLN 554
IKYLGV + LSW + + L+ ++++ L +L+
Sbjct: 806 IKYLGVRVHAHLSWVPHVKEITLKATRIVHAVNRLMPNLH 845
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 36.3 bits (80), Expect = 8e-04
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 86 GVTQGSILGPTLFLIYINDLCTLDLP--HCKILTYADDTA 199
GV QGS+LGPTL+ + +DL L L I+ +ADD A
Sbjct: 620 GVPQGSVLGPTLWNVMYDDLLRLPLEGLRADIIGFADDVA 659
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 34.7 bits (76), Expect = 0.002
Identities = 17/44 (38%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 77 LTFGVTQGSILGPTLFLIYINDLCTLDL-PHCKILTYADDTALI 205
++ GV Q SILGPTL+ + + + ++L P +++ YADD L+
Sbjct: 636 ISAGVPQESILGPTLWNVMYDGVLGVELPPGAELIGYADDLVLL 679
Score = 25.0 bits (52), Expect = 1.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 435 IKYLGVLIDXVLSWHEQINSVVLRIRKMI 521
+KYLGV + LSW + +V+ + +++
Sbjct: 745 LKYLGVRLHYNLSWVPHVKAVIQKATQIV 773
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 31.9 bits (69), Expect = 0.016
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 5 VFKDYLNDRYQCVKIDDITSEDALLTFGVTQGSILGPTLFLIYINDLCTLDLPH-CKILT 181
+ +DY DR D ++ G QGS+LGP L+ + + + L+LP + +
Sbjct: 603 ILQDYFTDRELTYDTTD-GPVTRRVSAGCPQGSMLGPRLWNVGYDGVLRLELPEGAQAVG 661
Query: 182 YADDTALI 205
+ DD A++
Sbjct: 662 FVDDLAIV 669
Score = 25.0 bits (52), Expect = 1.9
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +3
Query: 435 IKYLGVLIDXVLSWHEQINSVVLRIRKMIYIFKNL 539
I+YLGV+I W + V + +++ + N+
Sbjct: 734 IRYLGVMIHDHFLWRPHVTMAVEKANRVVKVVTNV 768
>AJ970250-1|CAI96722.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 25.8 bits (54), Expect = 1.1
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 11 KDYLNDRYQCVKIDDITSEDALLTFGVTQGS 103
K YL +R VKID S+ + + GV QGS
Sbjct: 102 KSYLINRTYIVKIDKHMSKKIVSSSGVPQGS 132
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 25.0 bits (52), Expect = 1.9
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -1
Query: 542 PQVFENINHFSYS*HYTINLFMPGKNXIYQYTKIFY 435
P +F NI + YT+NL +P Y +FY
Sbjct: 240 PDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFY 275
Score = 22.6 bits (46), Expect = 9.9
Identities = 10/36 (27%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 24 MIVINVSKLMTLPVRTL-CSPLA*HKVVSWGRRFFL 128
MI++ +S ++T+ + + + HK+ W R+FF+
Sbjct: 323 MILVGLSVVITIIILNIHYRKPSTHKMAPWVRKFFI 358
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,863
Number of Sequences: 2352
Number of extensions: 11163
Number of successful extensions: 42
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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