Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_D02
         (596 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    48   5e-06
U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    44   6e-05
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    42   3e-04
AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical ...    39   0.002
Z82057-3|CAB04860.2|  303|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z70684-10|CAA94602.2|  684|Caenorhabditis elegans Hypothetical p...    29   1.9  
Z81547-5|CAE17817.1|  112|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AL021489-3|CAE18015.1|  112|Caenorhabditis elegans Hypothetical ...    29   2.5  
Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AC025716-6|AAK95889.1|  401|Caenorhabditis elegans Hypothetical ...    27   7.7  

>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
            protein F21E9.1 protein.
          Length = 1170

 Score = 48.0 bits (109), Expect = 5e-06
 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 8    FKDYLNDRYQCVKIDDITSEDAL-LTFGVTQGSILGPTLFLIYINDLCTLDLPHCKILTY 184
            +K++L +R   VKI+   S+++  ++ GV QGS+ GP LF+++IN+L     P   I  +
Sbjct: 853  YKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLFILFINNLLIDLAPTINISCF 912

Query: 185  ADDTAL 202
            ADD  +
Sbjct: 913  ADDVKI 918


>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 44.4 bits (100), Expect = 6e-05
 Identities = 23/63 (36%), Positives = 35/63 (55%)
 Frame = +2

Query: 14  DYLNDRYQCVKIDDITSEDALLTFGVTQGSILGPTLFLIYINDLCTLDLPHCKILTYADD 193
           ++L++R   V+I    S     T GV QG++L P LF IY+ND+ ++         +ADD
Sbjct: 52  EFLSNRSFRVRIGQTLSSRKFATCGVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADD 111

Query: 194 TAL 202
           T L
Sbjct: 112 TKL 114


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +2

Query: 8   FKDYLNDRYQCVKIDD-ITSEDALLTFGVTQGSILGPTLFLIYINDLCTLDLPHCKILTY 184
           F D+L+ R   VK+++ I      ++ GV +GS+ GP LFLI+IN L     P      +
Sbjct: 29  FHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGSVSGPFLFLIFINSLLLSVPPSISCSAF 88

Query: 185 ADD 193
           ADD
Sbjct: 89  ADD 91


>AF100669-1|AAK39265.1|  931|Caenorhabditis elegans Hypothetical
           protein R11E3.3 protein.
          Length = 931

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 22/64 (34%), Positives = 35/64 (54%)
 Frame = +2

Query: 14  DYLNDRYQCVKIDDITSEDALLTFGVTQGSILGPTLFLIYINDLCTLDLPHCKILTYADD 193
           +YL+ R      D+  S+   L  GV QGS++ P LF  Y+ D+ T       +++YADD
Sbjct: 508 NYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQ--DTMLISYADD 565

Query: 194 TALI 205
            ++I
Sbjct: 566 MSII 569


>Z82057-3|CAB04860.2|  303|Caenorhabditis elegans Hypothetical
           protein T26H8.2 protein.
          Length = 303

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
 Frame = +2

Query: 44  KIDDITSEDALLTFGVTQGSILGPTLFLIYINDLCTLDLPHCKILTYADDTALIIDEQHG 223
           K+  + +   +LT   + G  +  T+F   ++ +C  DL   K  +Y     LII  +  
Sbjct: 34  KLPSLKNSFGMLTTSQSIGDAVHSTIFAFIVSSMCFFDLKFLKSYSYIVGHILIITYEVS 93

Query: 224 ------*KLNPMLKL--PCNYELAIYQFINT*CKKV*FCYFALKKSLLPSDDFTIQAHTC 379
                   LN    +  P +YE +I+   NT  K++    +AL  ++ PS  F +  + C
Sbjct: 94  TYSHLCISLNRFCSIVAPISYE-SIFNSSNT--KQLIIISWAL--AIFPSFYFYVY-NDC 147

Query: 380 VSHYNYLCSCQYLTHTIS-NKISWCTD 457
              YN + S  + T + S + I W  D
Sbjct: 148 KLFYNEVFSAFFFTRSPSCSTIVWYAD 174


>Z70684-10|CAA94602.2|  684|Caenorhabditis elegans Hypothetical
           protein F28D1.9 protein.
          Length = 684

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -2

Query: 136 YINKKKRRPQDTTLCYAKGEQSVLTGNVINFDTL 35
           Y+NKK+   +     +AKG+   LTG+++++D L
Sbjct: 500 YLNKKETNKKIIRDVFAKGDSCFLTGDLLHWDRL 533


>Z81547-5|CAE17817.1|  112|Caenorhabditis elegans Hypothetical
           protein F53F8.6 protein.
          Length = 112

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -2

Query: 142 IIYINKK-KRRPQDTTLCYAKGEQSVLTGNVINFDT 38
           I YI +K KRR ++  LC A+  ++++   +IN DT
Sbjct: 68  ITYIRRKLKRRHENGLLCRAETSETLIESTLINSDT 103


>AL021489-3|CAE18015.1|  112|Caenorhabditis elegans Hypothetical
           protein F53F8.6 protein.
          Length = 112

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -2

Query: 142 IIYINKK-KRRPQDTTLCYAKGEQSVLTGNVINFDT 38
           I YI +K KRR ++  LC A+  ++++   +IN DT
Sbjct: 68  ITYIRRKLKRRHENGLLCRAETSETLIESTLINSDT 103


>Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical
           protein K03D7.6 protein.
          Length = 352

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = +3

Query: 282 LLTLNVKKSSFVTSLLKSPCYLPMILLSRLI-HVFPTXXXXXXXXXXXXQFLIKYLGVLI 458
           L++L  +  +F   + K+P  +  +  S LI H+F               F +   G+  
Sbjct: 38  LISLPFQILAFYVIIFKTPISMKNVKTSLLINHLFCALLDLFLCTVCTVYFFLPMYGMFF 97

Query: 459 DXVLSWHEQINSVVLRI 509
             VLSW E  N V L I
Sbjct: 98  VGVLSWFEVPNGVQLLI 114


>AC025716-6|AAK95889.1|  401|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.9 protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 337 GLFKSEVTKLDFFTLSVNKLVD 272
           G+ K E TK +FF + + KLVD
Sbjct: 37  GIKKFEATKTEFFQVQITKLVD 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,824,636
Number of Sequences: 27780
Number of extensions: 236592
Number of successful extensions: 464
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)