Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_D01
(612 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 180 7e-46
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 180 7e-46
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 180 7e-46
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 180 7e-46
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 168 2e-42
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 153 7e-38
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 152 2e-37
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 152 2e-37
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 40 0.001
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 29 2.0
AF025464-8|AAB71019.1| 714|Caenorhabditis elegans Hypothetical ... 28 6.0
U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical pr... 27 8.0
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 180 bits (438), Expect = 7e-46
Identities = 87/157 (55%), Positives = 113/157 (71%), Gaps = 4/157 (2%)
Frame = +3
Query: 114 MPAKAVCVLHGD-VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSA 290
M +AV VL G+ V+GT++ QK E+ V+ GE+KGL+ G HGFHVH++GD+TNGC SA
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA 60
Query: 291 GAHFNPLKQEHGAPDSDTRHIG*XLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLV 470
G HFNP + HG P S+ RH+G LGN+EA +D GV K+ + D+ ++L GPN++VGR++V
Sbjct: 61 GPHFNPFGKTHGGPKSEIRHVG-DLGNVEAGAD-GVAKIKLTDTLVTLYGPNTVVGRSMV 118
Query: 471 VHADPDHLGLG---GHELSKSTGNAGARIACGVIGLA 572
VHA D LG G E SK TGNAGAR ACGVI LA
Sbjct: 119 VHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 180 bits (438), Expect = 7e-46
Identities = 87/157 (55%), Positives = 113/157 (71%), Gaps = 4/157 (2%)
Frame = +3
Query: 114 MPAKAVCVLHGD-VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSA 290
M +AV VL G+ V+GT++ QK E+ V+ GE+KGL+ G HGFHVH++GD+TNGC SA
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA 60
Query: 291 GAHFNPLKQEHGAPDSDTRHIG*XLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLV 470
G HFNP + HG P S+ RH+G LGN+EA +D GV K+ + D+ ++L GPN++VGR++V
Sbjct: 61 GPHFNPFGKTHGGPKSEIRHVG-DLGNVEAGAD-GVAKIKLTDTLVTLYGPNTVVGRSMV 118
Query: 471 VHADPDHLGLG---GHELSKSTGNAGARIACGVIGLA 572
VHA D LG G E SK TGNAGAR ACGVI LA
Sbjct: 119 VHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 180 bits (438), Expect = 7e-46
Identities = 87/157 (55%), Positives = 113/157 (71%), Gaps = 4/157 (2%)
Frame = +3
Query: 114 MPAKAVCVLHGD-VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSA 290
M +AV VL G+ V+GT++ QK E+ V+ GE+KGL+ G HGFHVH++GD+TNGC SA
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA 60
Query: 291 GAHFNPLKQEHGAPDSDTRHIG*XLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLV 470
G HFNP + HG P S+ RH+G LGN+EA +D GV K+ + D+ ++L GPN++VGR++V
Sbjct: 61 GPHFNPFGKTHGGPKSEIRHVG-DLGNVEAGAD-GVAKIKLTDTLVTLYGPNTVVGRSMV 118
Query: 471 VHADPDHLGLG---GHELSKSTGNAGARIACGVIGLA 572
VHA D LG G E SK TGNAGAR ACGVI LA
Sbjct: 119 VHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 180 bits (438), Expect = 7e-46
Identities = 87/157 (55%), Positives = 113/157 (71%), Gaps = 4/157 (2%)
Frame = +3
Query: 114 MPAKAVCVLHGD-VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSA 290
M +AV VL G+ V+GT++ QK E+ V+ GE+KGL+ G HGFHVH++GD+TNGC SA
Sbjct: 23 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA 82
Query: 291 GAHFNPLKQEHGAPDSDTRHIG*XLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLV 470
G HFNP + HG P S+ RH+G LGN+EA +D GV K+ + D+ ++L GPN++VGR++V
Sbjct: 83 GPHFNPFGKTHGGPKSEIRHVG-DLGNVEAGAD-GVAKIKLTDTLVTLYGPNTVVGRSMV 140
Query: 471 VHADPDHLGLG---GHELSKSTGNAGARIACGVIGLA 572
VHA D LG G E SK TGNAGAR ACGVI LA
Sbjct: 141 VHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 177
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 168 bits (409), Expect = 2e-42
Identities = 85/154 (55%), Positives = 103/154 (66%), Gaps = 4/154 (2%)
Frame = +3
Query: 123 KAVCVLHGD-VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAH 299
+AV VL G V GTV+ QK E GE+KGLS G HGFH+H++GD+T+GCTSAG H
Sbjct: 24 RAVAVLRGTAVFGTVWLTQKAEGEETEFEGEIKGLSPGLHGFHIHQYGDSTDGCTSAGPH 83
Query: 300 FNPLKQEHGAPDSDTRHIG*XLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVVHA 479
FNP K HG DS RH+G LGN+EA +D GV K+ D +SL G N+++GR++VVH
Sbjct: 84 FNPCKMNHGGRDSVVRHVG-DLGNVEAGAD-GVAKIKFSDKVVSLFGANTVIGRSMVVHV 141
Query: 480 DPDHLGLG---GHELSKSTGNAGARIACGVIGLA 572
D D LG G E S TGNAGAR ACGVI LA
Sbjct: 142 DRDDLGQGIDDKAEESLKTGNAGARAACGVIALA 175
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 153 bits (372), Expect = 7e-38
Identities = 74/143 (51%), Positives = 97/143 (67%)
Frame = +3
Query: 147 DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFNPLKQEHG 326
++ GT+ FDQ S + ++G V GL+ GKHGFH+HE GD NGC SAG H+NP K HG
Sbjct: 39 ELIGTIDFDQS--GSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHG 96
Query: 327 APDSDTRHIG*XLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVVHADPDHLGLGG 506
APD RHIG LGNIE+ + G T + + DS SL G SI+GR++V+H D LG G
Sbjct: 97 APDDSNRHIG-DLGNIESPASGD-TLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGT 154
Query: 507 HELSKSTGNAGARIACGVIGLAK 575
+ SK+TGNAG+R+ACG IG+ +
Sbjct: 155 SDQSKTTGNAGSRLACGTIGIVE 177
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 152 bits (369), Expect = 2e-37
Identities = 74/140 (52%), Positives = 95/140 (67%)
Frame = +3
Query: 147 DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFNPLKQEHG 326
++ GT+ FDQ S + ++G V GL+ GKHGFH+HE GD NGC SAG H+NP K HG
Sbjct: 39 ELIGTIDFDQS--GSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHG 96
Query: 327 APDSDTRHIG*XLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVVHADPDHLGLGG 506
APD RHIG LGNIE+ + G T + + DS SL G SI+GR++V+H D LG G
Sbjct: 97 APDDSNRHIG-DLGNIESPASGD-TLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGT 154
Query: 507 HELSKSTGNAGARIACGVIG 566
+ SK+TGNAG+R+ACG IG
Sbjct: 155 SDQSKTTGNAGSRLACGTIG 174
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 152 bits (369), Expect = 2e-37
Identities = 74/140 (52%), Positives = 95/140 (67%)
Frame = +3
Query: 147 DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFNPLKQEHG 326
++ GT+ FDQ S + ++G V GL+ GKHGFH+HE GD NGC SAG H+NP K HG
Sbjct: 39 ELIGTIDFDQS--GSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHG 96
Query: 327 APDSDTRHIG*XLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVVHADPDHLGLGG 506
APD RHIG LGNIE+ + G T + + DS SL G SI+GR++V+H D LG G
Sbjct: 97 APDDSNRHIG-DLGNIESPASGD-TLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGT 154
Query: 507 HELSKSTGNAGARIACGVIG 566
+ SK+TGNAG+R+ACG IG
Sbjct: 155 SDQSKTTGNAGSRLACGTIG 174
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical protein
T01D3.3b protein.
Length = 1011
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 186 SSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFN 305
S+ + + GEV L G+H +H+FGD++ GC+ GA F+
Sbjct: 906 STALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGAPFS 945
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 186 SSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFN 305
S+ + + GEV L G+H +H+FGD++ GC+ GA F+
Sbjct: 697 STALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGAPFS 736
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = -1
Query: 555 RRQYGLQHCL*TCSIRDLQVRDDQDPHGLPKCVQQCCWVQLTRSESPECK 406
++QY +Q C+ C++ + Q Q +P+C QQC Q + +P+C+
Sbjct: 309 KQQYPVQQCIQPCTV-ECQTACQQ---AVPQCQQQCA-PQCYQPSAPQCQ 353
>AF025464-8|AAB71019.1| 714|Caenorhabditis elegans Hypothetical
protein F53G2.1 protein.
Length = 714
Score = 27.9 bits (59), Expect = 6.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 286 LLELTSTH*SRSMVHLIRILVTLDDX*EILKLPVMVVLLRFAFRTLR 426
L+E S + S+ H + L+TLD +ILK + L+ +A T+R
Sbjct: 619 LMENCSNYLPSSIAHYYKHLITLDFLHDILKTTKGIGLILWALSTIR 665
>U41274-6|AAA82462.1| 601|Caenorhabditis elegans Hypothetical
protein T04G9.6 protein.
Length = 601
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +2
Query: 449 HCW-THFGSPCGS*SSRTWRSRIEQVYRQCWSPYCL----RCHRISQDLSFS 589
+CW T + P + +W++ V+R Y RCH+I++DLS S
Sbjct: 475 NCWETEYEQPLPPHTCVSWKTAKAFVFRSAPQNYYFDLVSRCHKITKDLSNS 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,956,453
Number of Sequences: 27780
Number of extensions: 296260
Number of successful extensions: 619
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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