Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_C22
         (504 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        25   1.1  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        25   1.1  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        25   1.1  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        25   1.1  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   1.1  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   1.9  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   5.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.8  

>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 368 VCGSHGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCI 502
           VC  HG+    +CS  C +          DGE Q A  +S   CI
Sbjct: 35  VCSGHGQCNCGRCS--CDESFFGPFCETKDGE-QPALCSSYEDCI 76


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 368 VCGSHGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCI 502
           VC  HG+    +CS  C +          DGE Q A  +S   CI
Sbjct: 35  VCSGHGQCNCGRCS--CDESFFGPFCETKDGE-QPALCSSYEDCI 76


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 368 VCGSHGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCI 502
           VC  HG+    +CS  C +          DGE Q A  +S   CI
Sbjct: 35  VCSGHGQCNCGRCS--CDESFFGPFCETKDGE-QPALCSSYEDCI 76


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 368 VCGSHGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCI 502
           VC  HG+    +CS  C +          DGE Q A  +S   CI
Sbjct: 35  VCSGHGQCNCGRCS--CDESFFGPFCETKDGE-QPALCSSYEDCI 76


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 15/45 (33%), Positives = 19/45 (42%)
 Frame = +2

Query: 368 VCGSHGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCI 502
           VC  HG+    +CS  C +          DGE Q A  +S   CI
Sbjct: 611 VCSGHGQCNCGRCS--CDESFFGPFCETKDGE-QPALCSSYEDCI 652


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +2

Query: 212 IYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIV 310
           I+S VCG   +T    C +Y      HS  T V
Sbjct: 342 IHSDVCGPMEETTLGGCRYYMTLIDDHSRYTFV 374


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -2

Query: 422 GCIPVNICWRKFFRESHRRGHI 357
           GC P  +CW   + E   R  I
Sbjct: 198 GCTPERLCWELHYLERCLRARI 219


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 268 LLRKGQDTQQYDNREKHRMRGGH 336
           LL++ Q  QQ+ + + H+ +G H
Sbjct: 637 LLQQQQQQQQHQHHQAHQHQGQH 659


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,894
Number of Sequences: 2352
Number of extensions: 12430
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)