Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_C21
         (111 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    19   5.6  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    18   9.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    18   9.8  

>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 9   YLYLCYKICHI 41
           Y  LCY I HI
Sbjct: 99  YKQLCYNINHI 109


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 24  YKICHINYFYYYNL 65
           Y  C I  F YYN+
Sbjct: 353 YIPCIIMVFLYYNI 366


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 18.2 bits (35), Expect = 9.8
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +2

Query: 8   VPVSVLQNLSYXXXXXXXXEMDKLCAL 88
           + V ++QNL+Y        + + + AL
Sbjct: 356 ISVKIIQNLAYSGRMNRIHKNEYMLAL 382


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,556
Number of Sequences: 438
Number of extensions: 260
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 17
effective length of database: 138,897
effective search space used:  2639043
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)