Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_C20
(494 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 34 0.014
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 32 0.055
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 30 0.22
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 27 1.2
SPCC126.06 |twf1||twinfilin|Schizosaccharomyces pombe|chr 3|||Ma... 27 1.6
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 27 1.6
SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 2.1
SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor Crm1|... 27 2.1
SPAC806.04c |||DUF89 family protein|Schizosaccharomyces pombe|ch... 26 2.7
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 26 2.7
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 3.6
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 25 4.7
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 25 4.7
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 4.7
SPAPB24D3.06c |||DUF1749 family protein|Schizosaccharomyces pomb... 25 4.7
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 25 4.7
SPCC16C4.01 |sif2|SPCC5E4.09|Sad1 interacting factor 2|Schizosac... 25 6.3
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 25 6.3
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 25 8.3
SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces ... 25 8.3
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 33.9 bits (74), Expect = 0.014
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = -1
Query: 302 ITATLKNSSNVVFIYISSFCSSTFARSLISS-TNLTTSMEP-APAPKKSVSFSISMRSIA 129
IT++ SS++ ++S SST + SL SS TN TTS P + A S+S + + S
Sbjct: 134 ITSSSLASSSITSSSLAS--SSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSAT 191
Query: 128 FQMLRAFSTNCFSSAVNSRETFSSLA 51
L + S N +SA + + SS A
Sbjct: 192 SSSLASSSLNSTTSATATSSSLSSTA 217
Score = 25.4 bits (53), Expect = 4.7
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -1
Query: 254 SSFCSSTFARSLISSTNLTTSMEPAPA---PKKSVSFSISMRSIAFQMLRAFSTNCFSSA 84
SS SS+ S SSTN TTS P + + S S++ S L A S+ SS
Sbjct: 83 SSLTSSSSLAS--SSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSL-ASSSITSSSL 139
Query: 83 VNSRETFSSLA 51
+S T SSLA
Sbjct: 140 ASSSITSSSLA 150
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 31.9 bits (69), Expect = 0.055
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 343 DGVEMEVNKMKIKF-PTQLFINGQFVNADSGKTLTLINPTDESVICKVPE 489
D VE+ V K P LFIN Q V++ G + + +P+ E +IC+V +
Sbjct: 7 DHVEITVPTGKTYIQPVGLFINNQHVDSVHGGRVKVYSPSTEKLICEVAD 56
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 29.9 bits (64), Expect = 0.22
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 379 KFPTQLFINGQFVNADSGKTLTLINP 456
+FP + +I G++V A SGKT + NP
Sbjct: 21 EFPARSYIGGKWVTAASGKTFDVENP 46
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 27.5 bits (58), Expect = 1.2
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = +1
Query: 7 LKVNGKMINAQNFFKASEEKVSLELTAEEKQFVENARNIWKAI 135
++ +G ++ + FFK +E + SLEL ++ F+ + + + +I
Sbjct: 890 IQASGTDLSTEEFFKRNENQDSLELRITKEDFLTSLKKLRPSI 932
>SPCC126.06 |twf1||twinfilin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 328
Score = 27.1 bits (57), Expect = 1.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 320 EPPLAFITATLKNSSNVVFIYISSFCSSTFARSLISSTNL 201
EP AF + SS ++FIYI ++ R + SS+ L
Sbjct: 229 EPNFAFYSLPKDGSSKILFIYICPMQATVKHRMVYSSSKL 268
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 27.1 bits (57), Expect = 1.6
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = +1
Query: 55 SEEKVSLELTAEEKQFVENARNIWKAIL--RIDIENDTDFFGAGAGSMDVVRLVEEIKDL 228
S+ V LTA E+ R+IW I+ D+ FF G S+ RL+ E++
Sbjct: 874 SKHGVDETLTATERDI----RDIWLRIIPHATDVNKKASFFDIGGHSILATRLIFELRKK 929
Query: 229 ANVELQNEDIYMNTTFE 279
V + ++ T E
Sbjct: 930 FAVNVPLGLVFSEPTIE 946
>SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 575
Score = 26.6 bits (56), Expect = 2.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 31 NAQNFFKASEEKVSLELTAEEKQFVENARN 120
NA F+KAS VS+ A +KQF+ N N
Sbjct: 501 NALIFYKASISLVSVLAPAAQKQFLSNYLN 530
>SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor
Crm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1078
Score = 26.6 bits (56), Expect = 2.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 140 RSIAFQMLRAFSTNCFSSAVN 78
R+ FQ+LRA + NCF + +N
Sbjct: 846 RAAFFQLLRAINLNCFPALLN 866
>SPAC806.04c |||DUF89 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 440
Score = 26.2 bits (55), Expect = 2.7
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +1
Query: 55 SEEKVSLELTAEEKQFVENARNIWKAI--LRIDIENDTDFFGAGAGSMDVVRLVEEIKDL 228
SE L T+++ + V + + + + DI+ND D+V EE+K L
Sbjct: 40 SERLSKLASTSKDSEVVAQGKPLLNDLEAFKSDIKNDRPLVPLEGEGQDIVEYNEELKQL 99
Query: 229 ANVELQN 249
N N
Sbjct: 100 DNASWGN 106
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 26.2 bits (55), Expect = 2.7
Identities = 26/107 (24%), Positives = 43/107 (40%)
Frame = +1
Query: 19 GKMINAQNFFKASEEKVSLELTAEEKQFVENARNIWKAILRIDIENDTDFFGAGAGSMDV 198
GK+ N K SL+ + E + VEN +N+ RI + D A +
Sbjct: 483 GKLKNHSQSQKDYNSSTSLDSSEESEVDVENKQNVRTKYDRIFERKNQDVLAAHRQRLVE 542
Query: 199 VRLVEEIKDLANVELQNEDIYMNTTFEEFFNVAVMKARGGSANKEIV 339
V E+ D V+ + D+ T E F + K + S+ K ++
Sbjct: 543 VNSDEDDGDFLQVKRVDHDL-PEETGERFNANSKRKEKMASSKKAML 588
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 25.8 bits (54), Expect = 3.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 202 RLVEEIKDLANVELQNEDIYMNTTFEEFFNVA 297
++++E N+E +D Y N + F NVA
Sbjct: 711 QMLQEFLSFPNIEQLLDDCYANYVMQRFLNVA 742
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 25.4 bits (53), Expect = 4.7
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 311 EAAQRTRKSFTMASKWK*TR*KSNSLHSYSL 403
+AA + RKS T++SK R +++SLHS L
Sbjct: 256 QAANQKRKSKTVSSKNNFQRLQNSSLHSIFL 286
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.4 bits (53), Expect = 4.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 183 GACSEEVSIVFNIDAEYRLPNVTGV 109
G E S+ FN YRLPN+T +
Sbjct: 229 GLNHSEPSVDFNNQTSYRLPNLTNL 253
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 4.7
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = -1
Query: 296 ATLKNSSNVVFIYISSFCSSTFARSLISSTNLTTSMEPAPAPKKSVSFSISMRSIAFQML 117
+TL S+ IY S+ SST + + S++ TTS + + +S SI+ SI+
Sbjct: 122 STLAASTISGGIYSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSIT-SSISSSAS 180
Query: 116 RAFSTNCFSSA 84
+ S++ SS+
Sbjct: 181 SSVSSSSASSS 191
Score = 25.0 bits (52), Expect = 6.3
Identities = 21/70 (30%), Positives = 31/70 (44%)
Frame = -1
Query: 242 SSTFARSLISSTNLTTSMEPAPAPKKSVSFSISMRSIAFQMLRAFSTNCFSSAVNSRETF 63
SST A S SST +S + S S + SI + + S++ SS+ +S +
Sbjct: 135 SSTSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSSGSI 194
Query: 62 SSLALKKFCA 33
SS K A
Sbjct: 195 SSADAKTVSA 204
>SPAPB24D3.06c |||DUF1749 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 316
Score = 25.4 bits (53), Expect = 4.7
Identities = 11/56 (19%), Positives = 28/56 (50%)
Frame = +1
Query: 145 DIENDTDFFGAGAGSMDVVRLVEEIKDLANVELQNEDIYMNTTFEEFFNVAVMKAR 312
D+ + DFF + + D + +K+++ ++ I + + +EF + + KA+
Sbjct: 206 DVRGNDDFFSSDLSADDFAKTFGNLKEISGSTAHSQLILLMSERDEFVSPSTDKAQ 261
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.4 bits (53), Expect = 4.7
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 235 VELQNEDIYMNTTFEEFFNVAVMKARGGSANKEI-VYD 345
+++ N+DIY + + N A+ ARG S + + +YD
Sbjct: 818 IQVINDDIYPSYVHLDSNNYAIAAARGDSDGENVFIYD 855
>SPCC16C4.01 |sif2|SPCC5E4.09|Sad1 interacting factor
2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 446
Score = 25.0 bits (52), Expect = 6.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 420 IHKLSINE*LCREFDFHLVHFHFDAIVNDFLVR*AASSF 304
I KL I + EF++++ + I NDF+ AS++
Sbjct: 188 IEKLKIEDMEVEEFNYYITTLYQPRIFNDFIALRDASNY 226
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 25.0 bits (52), Expect = 6.3
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = -1
Query: 254 SSFCSSTFARSLISSTNLTTSMEPAPAPKKSVSFSISMRSIAFQMLRAFSTNCFSSAVNS 75
S+ SS+ + SST TTS + + S S S S S + + S++ SS+ +S
Sbjct: 134 STTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 193
Query: 74 RETFSS 57
+ SS
Sbjct: 194 SSSSSS 199
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 24.6 bits (51), Expect = 8.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 229 ANVELQNEDIYMNTTFEEFFNVAVMKARGGSANKEIVYDGVE 354
+N+ NE MN EEF A +A ANKE + VE
Sbjct: 833 SNIRKANE--IMNNRSEEFLRNAASQAEIVGANKERIQKTVE 872
>SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 425
Score = 24.6 bits (51), Expect = 8.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 218 ISSTNLTTSMEPAPAPKKSV 159
+SST+LT S P P P ++
Sbjct: 328 VSSTSLTKSSSPKPLPSSAI 347
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.133 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,838,510
Number of Sequences: 5004
Number of extensions: 35226
Number of successful extensions: 136
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 194131776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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