Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_C20
         (494 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.4  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   3.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.1  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   4.1  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   5.4  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   5.4  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   5.4  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   5.4  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   5.4  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   5.4  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   5.4  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   5.4  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   5.4  
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    21   7.2  
M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee homeobox-...    21   9.5  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   9.5  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 349 VEMEVNKMKI--KFPTQLFINGQFVNADSGKTLTLINPTDESVICKV 483
           VE +V+ M     FP  L  N   +   +G T+T + P   S  CK+
Sbjct: 202 VEPKVSPMTFCRVFPFHLMFNRDLIIVQTGCTITRVIPQVCSGNCKL 248


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
 Frame = +1

Query: 349 VEMEVNKMKI--KFPTQLFINGQFVNADSGKTLTLINPTDESVICKV 483
           VE +V+ M     FP  L  N   +   +G T+T + P   S  CK+
Sbjct: 202 VEPKVSPMTFCRVFPFHLMFNRDLIIVQTGCTITRVIPQVCSGNCKL 248


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2

Query: 122 FGRRYSASILKTILTSSEQAPAPWTLS 202
           + +R+S+SI+     SS ++P+P  L+
Sbjct: 24  YSKRFSSSIVDRRSPSSSRSPSPSLLT 50


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 300 YES*RRLSEQGNRLRW 347
           + S RRL+ + +R+RW
Sbjct: 77  FSSIRRLNSEAHRIRW 92


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 328 KEIVYDGVEMEVNKMKIKFPTQLF 399
           KE+    +E    K K KFP + F
Sbjct: 129 KEVHSGNIEAVTTKEKAKFPQEFF 152


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 24  NDQRAKLLQSERGESLPRVDSRREAIRRKR 113
           +D+R +  +SE  E+  R  ++ E +RR+R
Sbjct: 11  HDERFRQSRSEDSETGLRSRTQEERLRRRR 40


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 24  NDQRAKLLQSERGESLPRVDSRREAIRRKR 113
           +D+R +  +SE  E+  R  ++ E +RR+R
Sbjct: 11  HDERFRQSRSEDSETGLRSRTQEERLRRRR 40


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 24  NDQRAKLLQSERGESLPRVDSRREAIRRKR 113
           +D+R +  +SE  E+  R  ++ E +RR+R
Sbjct: 11  HDERFRQSRSEDSETGLRSRTQEERLRRRR 40


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 24  NDQRAKLLQSERGESLPRVDSRREAIRRKR 113
           +D+R +  +SE  E+  R  ++ E +RR+R
Sbjct: 11  HDERFRQSRSEDSETGLRSRTQEERLRRRR 40


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 24  NDQRAKLLQSERGESLPRVDSRREAIRRKR 113
           +D+R +  +SE  E+  R  ++ E +RR+R
Sbjct: 11  HDERFRQSRSEDSETGLRSRTQEERLRRRR 40


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 24  NDQRAKLLQSERGESLPRVDSRREAIRRKR 113
           +D+R +  +SE  E+  R  ++ E +RR+R
Sbjct: 11  HDERFRQSRSEDSETGLRSRTQEERLRRRR 40


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 24  NDQRAKLLQSERGESLPRVDSRREAIRRKR 113
           +D+R +  +SE  E+  R  ++ E +RR+R
Sbjct: 11  HDERFRQSRSEDSETGLRSRTQEERLRRRR 40


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 361 LPFRRHRKRFPC 326
           +P  RH+K +PC
Sbjct: 206 VPAERHKKYYPC 217


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 24  NDQRAKLLQSERGESLPRVDSRREAIRRKR 113
           +D+R +  +SE  E+  R  ++ E +RR+R
Sbjct: 11  HDERFRQSRSEDSETGLRSRTQEERLRRRR 40


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = +3

Query: 327 QGNRLRWRRNGSEQDENQIPY 389
           Q  R++W++       N +PY
Sbjct: 57  QNRRMKWKKEHKMASMNIVPY 77


>M29492-1|AAA27727.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H40. ).
          Length = 74

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 196 RPWSRRLLRRSQYRFQY 146
           R W RR  RR++  F Y
Sbjct: 1   RRWDRREARRARTAFTY 17


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 384 EFDFHLVHFHFDAIVNDFLVR 322
           E+   LV+FH    + +FL++
Sbjct: 199 EYSMLLVYFHLQRHMGNFLIQ 219


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.133    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,733
Number of Sequences: 438
Number of extensions: 2240
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)