Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_C19
         (274 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83216-11|CAB05679.2|  404|Caenorhabditis elegans Hypothetical p...    28   1.0  
AF026203-1|AAB71246.2|  506|Caenorhabditis elegans Hypothetical ...    26   3.2  
AF067608-4|AAK95863.2|  473|Caenorhabditis elegans Hypothetical ...    26   4.2  
Z92835-6|CAB07399.1|  496|Caenorhabditis elegans Hypothetical pr...    25   9.7  
Z75526-8|CAA99773.1|  496|Caenorhabditis elegans Hypothetical pr...    25   9.7  
U50300-6|AAC48109.1|  642|Caenorhabditis elegans Hypothetical pr...    25   9.7  
AL032637-17|CAD60427.1|  294|Caenorhabditis elegans Hypothetical...    25   9.7  
AF221132-1|AAF82410.1|  498|Caenorhabditis elegans diacylglycero...    25   9.7  

>Z83216-11|CAB05679.2|  404|Caenorhabditis elegans Hypothetical
           protein C08F11.13 protein.
          Length = 404

 Score = 27.9 bits (59), Expect = 1.0
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = -2

Query: 267 SPVPVFIKVILIKYNLYFILIKC----SIHYFVIWKLP*IAVFLCNTVFLYLFILC 112
           SP  V  +  + K+ L+F+LI C    SI  +VI K+  + VF  N++F  L   C
Sbjct: 321 SPKNVETRFFMKKWYLWFLLINCVIWSSIPLYVIGKVGNV-VFSPNSLFWALLTFC 375


>AF026203-1|AAB71246.2|  506|Caenorhabditis elegans Hypothetical
           protein E03E2.1 protein.
          Length = 506

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 264 PVPVFIKVILIKYNLYFILIKCSIH 190
           PV +F  V L  + LY+ L KC ++
Sbjct: 8   PVAIFTYVFLRNFKLYYTLHKCGLN 32


>AF067608-4|AAK95863.2|  473|Caenorhabditis elegans Hypothetical
           protein B0511.13 protein.
          Length = 473

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 261 VPVFIKVILIKYNLYFI 211
           VP+ + +IL+ YN YFI
Sbjct: 9   VPILLAIILVVYNEYFI 25


>Z92835-6|CAB07399.1|  496|Caenorhabditis elegans Hypothetical
           protein H19N07.4 protein.
          Length = 496

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 192 HYFVIWKLP*IAVFLCNTV 136
           H++ IW  P +A+ LC+ +
Sbjct: 108 HHYSIWSWPNLALILCSNI 126


>Z75526-8|CAA99773.1|  496|Caenorhabditis elegans Hypothetical
           protein H19N07.4 protein.
          Length = 496

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 192 HYFVIWKLP*IAVFLCNTV 136
           H++ IW  P +A+ LC+ +
Sbjct: 108 HHYSIWSWPNLALILCSNI 126


>U50300-6|AAC48109.1|  642|Caenorhabditis elegans Hypothetical
           protein R03H4.1 protein.
          Length = 642

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 195 IHYFVIWKLP*IAVFLCNTVFLYLF 121
           + Y V W  P I +FL NTV  Y+F
Sbjct: 296 VMYLVHW--PIITIFLSNTVKSYIF 318


>AL032637-17|CAD60427.1|  294|Caenorhabditis elegans Hypothetical
           protein Y43F8C.19 protein.
          Length = 294

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -2

Query: 237 LIKYNLYFILIKCSIHYFVIWKLP*IAVFLCNTVFLYLFI 118
           L+K +  FI+ KC++  FV++ +P        ++FLY +I
Sbjct: 218 LLKNSTEFIIFKCAVFSFVLF-IP----NALKSIFLYFYI 252


>AF221132-1|AAF82410.1|  498|Caenorhabditis elegans diacylglycerol
           acyltransferase protein.
          Length = 498

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 192 HYFVIWKLP*IAVFLCNTV 136
           H++ IW  P +A+ LC+ +
Sbjct: 110 HHYSIWSWPNLALILCSNI 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,990,839
Number of Sequences: 27780
Number of extensions: 55286
Number of successful extensions: 99
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 227290938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)