Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_C18
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical... 151 3e-37
AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical... 146 1e-35
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 38 0.004
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 29 1.7
AF100307-9|AAC68938.1| 321|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z78540-3|CAB01735.2| 482|Caenorhabditis elegans Hypothetical pr... 28 5.3
U10402-4|AAK95873.1| 255|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z82056-1|CAB04854.1| 325|Caenorhabditis elegans Hypothetical pr... 27 9.2
U88178-7|ABA03111.1| 439|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical ... 27 9.2
AC006676-2|AAK71382.3| 439|Caenorhabditis elegans Hypothetical ... 27 9.2
>AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical
protein Y71F9B.9a protein.
Length = 284
Score = 151 bits (367), Expect = 3e-37
Identities = 74/181 (40%), Positives = 105/181 (58%)
Frame = +3
Query: 3 STSTTLPSLFSENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEVTKKTRAIMEEIGQ 182
STST S F++ + +K + ++ HPVNPP ++PL E+VPAPWT + + IM + Q
Sbjct: 89 STSTIPASKFTDGLINKERCLIVHPVNPPLFLPLTELVPAPWTSQDTVDRAAEIMRSVKQ 148
Query: 183 EPVTLSREIDGFVLNRIQYAILGEVWRLVDEXXXXXXXXXXXXSEGLGMRYAFLGSLETA 362
EPV L +E+ GFV+NR+Q+A+L E WRLV + S GLG RYAF G+ ET
Sbjct: 149 EPVKLKKEVLGFVVNRLQFALLAETWRLVADGVIGVNDVDAVMSAGLGPRYAFNGTCETV 208
Query: 363 HLNAEGMDNYIDRYGETIHNVSNTFGPIPXMTTNKSRETVCKQLEQMTPLDKLQERRAWR 542
HLNA G+ +Y RY I V GPIP T K + ++LE +++ +A R
Sbjct: 209 HLNAFGVRDYFKRYAAGITAVLKDMGPIPDFTDEKVINKLEEELEPKMSTLNIRKHQAER 268
Query: 543 D 545
+
Sbjct: 269 E 269
>AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical
protein Y71F9B.9b protein.
Length = 281
Score = 146 bits (354), Expect = 1e-35
Identities = 72/181 (39%), Positives = 105/181 (58%)
Frame = +3
Query: 3 STSTTLPSLFSENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEVTKKTRAIMEEIGQ 182
STST S F++ + +K + ++ HPVNPP ++PL E+VPAPWT + + IM + Q
Sbjct: 89 STSTIPASKFTDGLINKERCLIVHPVNPPLFLPLTELVPAPWTSQDTVDRAAEIMRSVKQ 148
Query: 183 EPVTLSREIDGFVLNRIQYAILGEVWRLVDEXXXXXXXXXXXXSEGLGMRYAFLGSLETA 362
EPV L +E+ GFV+NR+Q+A+L E WRLV + S GLG RYAF G+ ET
Sbjct: 149 EPVKLKKEVLGFVVNRLQFALLAETWRLVADGVIGVNDVDAVMSAGLGPRYAFNGTCETV 208
Query: 363 HLNAEGMDNYIDRYGETIHNVSNTFGPIPXMTTNKSRETVCKQLEQMTPLDKLQERRAWR 542
HLNA G+ +Y RY ++ GPIP T K + ++LE +++ +A R
Sbjct: 209 HLNAFGVRDYFKRYAA---GITADMGPIPDFTDEKVINKLEEELEPKMSTLNIRKHQAER 265
Query: 543 D 545
+
Sbjct: 266 E 266
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 38.3 bits (85), Expect = 0.004
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Frame = +3
Query: 72 HPVNPPYYVPLVEIVPAPWTKPEVTKKTRAIMEEIGQEPVTLSREIDGFVLNRIQYAILG 251
H NP + LVE+V T PE T +EI + PV +++ GF++NR+ L
Sbjct: 156 HFFNPVPVMKLVEVVSTDETSPETTNFLFNFCKEIKKLPVA-AKDTPGFIVNRLLIPYLM 214
Query: 252 EVWRLVDEXXXXXXXXXXXXSEGLGMRYAFLGSLETA-HLNAEGMDNYIDRYGETIHNVS 428
+ R+++ G Y +G +E ++ + + + + + ETI +
Sbjct: 215 DSIRMLERGDATKEDIDTAMR--FGTSYP-MGPIELCDYVGLDVLQSTLKIFRETIPGDA 271
Query: 429 NTFGPIPXM 455
F PIP M
Sbjct: 272 R-FAPIPLM 279
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 51 KAQVIVSHPVNPPYYVPLVEIVPAP 125
K + + PV+PP VP+ IVPAP
Sbjct: 700 KPDPVPAKPVSPPVIVPIDSIVPAP 724
>AF100307-9|AAC68938.1| 321|Caenorhabditis elegans Hypothetical
protein T12B5.11 protein.
Length = 321
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +3
Query: 423 VSNTFGPIPXMTTNKSRETVCKQLEQMTPLDKLQERRAWRD--ACLTR 560
+ +FGPI N V + LE++ P+D+L+ R+ R+ C+ R
Sbjct: 15 IHRSFGPISPTLYNMPINIVDQVLEKLEPMDRLKIRKVCRNLRTCVDR 62
>Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical
protein F01G10.3 protein.
Length = 434
Score = 27.9 bits (59), Expect = 5.3
Identities = 22/91 (24%), Positives = 39/91 (42%)
Frame = +3
Query: 3 STSTTLPSLFSENMKHKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEVTKKTRAIMEEIGQ 182
+TS+ + S ++ + ++ H NP + LVEI+ T + E I +
Sbjct: 150 NTSSLDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSSQAIATAFQACESIKK 209
Query: 183 EPVTLSREIDGFVLNRIQYAILGEVWRLVDE 275
PV L FV NR+ + + +L+ E
Sbjct: 210 LPV-LVGNCKSFVFNRLLHVYFDQSQKLMYE 239
>Z78540-3|CAB01735.2| 482|Caenorhabditis elegans Hypothetical
protein C33G3.5 protein.
Length = 482
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 117 PAPWTKPEVTKKTRAIMEEIGQEPVTLSREIDGFVLN 227
P+P T+P T +T A+ + Q VT++ E LN
Sbjct: 304 PSPSTEPSSTLRTSAVTPDSIQSTVTMTAEYKATTLN 340
>U10402-4|AAK95873.1| 255|Caenorhabditis elegans Hypothetical
protein C34E10.11 protein.
Length = 255
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 75 PVNPPYYVPLVEIVPAPWTKPE 140
P+ PP L +V APW KPE
Sbjct: 47 PILPPSKKVLYHVVHAPWQKPE 68
>Z82056-1|CAB04854.1| 325|Caenorhabditis elegans Hypothetical
protein T26H5.3 protein.
Length = 325
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = +3
Query: 27 LFSENMK----HKAQVIVSHPVNPPYYVPLVEIVPAPWTKPEVTKKTRAIMEEI---GQE 185
LF +N K K ++ S+ + P YY+P+ ++P T E++ + + E+ G+E
Sbjct: 119 LFGQNSKWRHFRKYAIVFSYIIVPLYYLPIQFLIPEQVTGRELSWAMLSCIPELPDDGRE 178
Query: 186 PVTLSREIDGFVLNRI 233
+ E+ G + I
Sbjct: 179 LFVFATELIGPAITMI 194
>U88178-7|ABA03111.1| 439|Caenorhabditis elegans Hypothetical
protein W09C3.1 protein.
Length = 439
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +3
Query: 90 YYVPLVEI-VPAPWTKPEVTKKTRAIMEEIGQEPVTLSREIDGFV-----LNRIQYAILG 251
++ L+E+ P PWT + ++ A+ E+ E ++ + F+ LN +QYA
Sbjct: 226 WFFMLMEMYAPLPWTSSNIPERIEALKEDHLNEYLSKDSFLSSFLPLVEYLNSVQYADRP 285
Query: 252 EVWRLVD 272
+ ++ D
Sbjct: 286 DYMKIYD 292
>AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical
protein T22B11.1 protein.
Length = 472
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 198 SREIDGFVLNRIQYAILGEVWR 263
S +ID F+LN Q+A + E+W+
Sbjct: 107 SEQIDEFLLNPSQFARVSEIWQ 128
>AC006676-2|AAK71382.3| 439|Caenorhabditis elegans Hypothetical
protein M04F3.3 protein.
Length = 439
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +3
Query: 90 YYVPLVEI-VPAPWTKPEVTKKTRAIMEEIGQEPVTLSREIDGFV-----LNRIQYAILG 251
++ L+E+ P PWT + ++ A+ E+ E ++ + F+ LN +QYA
Sbjct: 226 WFFMLMEMYAPLPWTSSNIPERIEALKEDHLNEYLSKDSFLSSFLPLVEYLNSVQYADRP 285
Query: 252 EVWRLVD 272
+ ++ D
Sbjct: 286 DYMKIYD 292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,147,009
Number of Sequences: 27780
Number of extensions: 234649
Number of successful extensions: 711
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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