Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_C14
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 66 2e-11
AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical... 60 8e-10
AC087079-17|AAT81177.1| 837|Caenorhabditis elegans Hypothetical... 60 8e-10
AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical ... 40 0.001
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 31 0.77
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 31 0.77
AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical ... 31 0.77
U23529-6|AAL32208.1| 384|Caenorhabditis elegans Hypothetical pr... 30 1.0
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 30 1.0
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 29 3.1
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 29 3.1
Z54236-10|CAA90986.1| 407|Caenorhabditis elegans Hypothetical p... 27 7.2
Z54235-12|CAA90977.1| 407|Caenorhabditis elegans Hypothetical p... 27 7.2
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 7.2
Z79757-6|CAB02127.1| 350|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 27 9.5
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +2
Query: 14 RLHTLGNAMGISSEILD-PYEAQKKFPLLDPSVFKMALFVPEDGTIDATITCNALIKVAK 190
R+++ G E+LD E +++P L ++ALF PED +D C L +AK
Sbjct: 121 RMYSRGVVHNDKVELLDCQSEMLERWPFLQTEDVQLALFSPEDVALDPVALCQHLALIAK 180
Query: 191 QNGGKVYEDCPVLDIHYSHNILGNKEVTGVHTERGIIKTKCVVNCGGAW 337
G +YE PVL++H I K+V GV T+ G I+T V+ G W
Sbjct: 181 DYGALIYESNPVLEVH----IGDEKQVYGVSTKMGFIETSHFVDAAGIW 225
>AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical
protein Y37E3.17a protein.
Length = 830
Score = 60.5 bits (140), Expect = 8e-10
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 56 ILDPYEAQKKFPLLDPSVFKMALFVPEDGTIDATITCNALIKVAKQNGGKVYEDCPVLDI 235
+L P + ++ P +D S AL DGTI A AL+ AK G +V + +I
Sbjct: 147 LLTPDQVRELAPDVDHSKILGALHTTNDGTISARALTQALVVGAKNGGAQVIDGAIPKEI 206
Query: 236 HYSHNILGNKEVTGVHTERG-IIKTKCVVNCGGAWGPRVARFAGVPSLPLVPFKHAYVLC 412
Y K + E G ++ T+ ++N GG W +AR +G +LP+V +H Y +
Sbjct: 207 KYDKE----KGHWIIALEDGTLVTTRNLINAGGIWANDIARLSG-HALPVVVVEHQYAVL 261
Query: 413 EATPEVRNCPNIRDHDTNLY 472
P I DHD+ Y
Sbjct: 262 TPNKTPGPTPAIIDHDSTFY 281
>AC087079-17|AAT81177.1| 837|Caenorhabditis elegans Hypothetical
protein Y37E3.17b protein.
Length = 837
Score = 60.5 bits (140), Expect = 8e-10
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 56 ILDPYEAQKKFPLLDPSVFKMALFVPEDGTIDATITCNALIKVAKQNGGKVYEDCPVLDI 235
+L P + ++ P +D S AL DGTI A AL+ AK G +V + +I
Sbjct: 154 LLTPDQVRELAPDVDHSKILGALHTTNDGTISARALTQALVVGAKNGGAQVIDGAIPKEI 213
Query: 236 HYSHNILGNKEVTGVHTERG-IIKTKCVVNCGGAWGPRVARFAGVPSLPLVPFKHAYVLC 412
Y K + E G ++ T+ ++N GG W +AR +G +LP+V +H Y +
Sbjct: 214 KYDKE----KGHWIIALEDGTLVTTRNLINAGGIWANDIARLSG-HALPVVVVEHQYAVL 268
Query: 413 EATPEVRNCPNIRDHDTNLY 472
P I DHD+ Y
Sbjct: 269 TPNKTPGPTPAIIDHDSTFY 288
>AC006768-1|AAF60576.2| 433|Caenorhabditis elegans Hypothetical
protein Y45G12B.3 protein.
Length = 433
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Frame = +2
Query: 119 ALFVPEDGTIDATITCNALIKVAKQNGGKVYEDCPVLDIHYSHNILGNKEVTGVHTERGI 298
AL+ P G +D + ++ GGK+Y P+ I +H+ G
Sbjct: 161 ALWSPHTGIVDWGYVTKRFGEDFEKRGGKIYTSYPLEKISDNHDP-GYPIRVSSGPALAE 219
Query: 299 IKTKCVVNCGGAWGPRVARFAGVPSLP-LVPFKHAYVLCEATPEVRN 436
+TK ++ C G RVA +G + P +VPF+ Y+L + PE R+
Sbjct: 220 FETKNLITCAGLQSDRVAALSGCSTDPKIVPFRGEYLLLK--PEKRH 264
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 30.7 bits (66), Expect = 0.77
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = -1
Query: 441 GQLRTSGVASHNTYACLK---GTKGREGTPANLATRGPHAPPQFTTH 310
GQ +G A H C+K G G G P N +GP+ P H
Sbjct: 116 GQPGVAGPAHHQQQECIKCPQGAPGPAGAPGNPGPQGPNGNPGAPAH 162
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 30.7 bits (66), Expect = 0.77
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 259 PEYIVRVMNIKHRTIFVNLSTILLCDFNECIASDSGINCT 140
PE + +V N+K + + V + CD +EC S SG C+
Sbjct: 76 PELVEKVENLKSKIVAVAAAGSEACDDSECSCSCSGGECS 115
>AF125459-5|AAD12844.1| 345|Caenorhabditis elegans Hypothetical
protein Y25C1A.8a protein.
Length = 345
Score = 30.7 bits (66), Expect = 0.77
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 259 PEYIVRVMNIKHRTIFVNLSTILLCDFNECIASDSGINCT 140
PE + +V N+K + + V + CD +EC S SG C+
Sbjct: 202 PELVEKVENLKSKIVAVAAAGSEACDDSECSCSCSGGECS 241
>U23529-6|AAL32208.1| 384|Caenorhabditis elegans Hypothetical
protein C15B12.1 protein.
Length = 384
Score = 30.3 bits (65), Expect = 1.0
Identities = 28/111 (25%), Positives = 45/111 (40%)
Frame = +2
Query: 5 EYMRLHTLGNAMGISSEILDPYEAQKKFPLLDPSVFKMALFVPEDGTIDATITCNALIKV 184
E ++HT GI E++ E K++P L P G I A NA
Sbjct: 97 EVEKIHTNLKLKGIKHEVIKGTEVGKRYPQFKFDDSWNGLIDPMGGVIYADKWLNAFRDE 156
Query: 185 AKQNGGKVYEDCPVLDIHYSHNILGNKEVTGVHTERGIIKTKCVVNCGGAW 337
K+ GG +++ +I SH+ + N V T + +K ++ G W
Sbjct: 157 FKKIGGIIHD----REIVLSHSEISNN--LFVTTNKSRYSSKKIIFTVGCW 201
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 30.3 bits (65), Expect = 1.0
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -3
Query: 361 GESSNTWSPRSSTIYNTFRLYNSSLSVNACYFLIP 257
G SSN SPRSST Y F Y ++L F +P
Sbjct: 976 GSSSNQLSPRSSTDYFEFGKYTNALRSATDEFALP 1010
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 387 GTKGREGTPANLATRGPHAPPQFTTHFVF 301
G G +GTP + GP APP H +F
Sbjct: 168 GADGVDGTPGEIGPPGPPAPPGPDPHSLF 196
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 28.7 bits (61), Expect = 3.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 387 GTKGREGTPANLATRGPHAPPQFTTHFVF 301
G G +GTP + GP APP H +F
Sbjct: 149 GADGVDGTPGEIGPPGPPAPPGPDPHSLF 177
>Z54236-10|CAA90986.1| 407|Caenorhabditis elegans Hypothetical
protein C09G9.6 protein.
Length = 407
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 359 AGVPSLPLVPFKHAYVLCEATPEVR 433
AGVP+LP+ P HA L + P +
Sbjct: 21 AGVPTLPVSPLDHAKDLSQTNPNAQ 45
>Z54235-12|CAA90977.1| 407|Caenorhabditis elegans Hypothetical
protein C09G9.6 protein.
Length = 407
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 359 AGVPSLPLVPFKHAYVLCEATPEVR 433
AGVP+LP+ P HA L + P +
Sbjct: 21 AGVPTLPVSPLDHAKDLSQTNPNAQ 45
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +3
Query: 387 LSNTHT-CYARLLLKFATVLTSETTTQICTIKIS---GESCAVG 506
LS T C A+ LL+F V+T + + C++ G+S AVG
Sbjct: 250 LSRARTACQAKALLRFLDVITEKQSNVTCSLTAGRGRGKSAAVG 293
>Z79757-6|CAB02127.1| 350|Caenorhabditis elegans Hypothetical
protein F55B12.6 protein.
Length = 350
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 192 CFATLMSALQVIVASIVPSSGTNNAIL 112
CFA S + VIVA + + GT+ +L
Sbjct: 50 CFAMFFSTIDVIVAPFIHTHGTSATVL 76
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = -1
Query: 441 GQLRTSGVASHNTYACLK---GTKGREGTPANLATRGPHAPP 325
GQ +G SH C+K G+ G G P +GP+ P
Sbjct: 117 GQPGVAGPKSHEQQECIKCPAGSPGPAGAPGAPGPQGPNGQP 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,289,356
Number of Sequences: 27780
Number of extensions: 344177
Number of successful extensions: 1089
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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