Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_C12
(574 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 166 1e-41
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 166 1e-41
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 165 2e-41
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 155 2e-38
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 87 7e-18
03_01_0034 + 318432-318825,318902-319851 87 7e-18
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 87 7e-18
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 87 7e-18
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 87 9e-18
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 87 9e-18
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 87 9e-18
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 85 3e-17
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 53 1e-07
03_01_0645 - 4731037-4731543,4731706-4731933 31 0.49
05_01_0029 + 187769-188707,188971-189246,189978-190174,190263-19... 29 2.6
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 29 3.5
05_06_0230 + 26585439-26586608 28 4.6
04_03_0208 + 12682369-12682543,12682858-12682889 28 4.6
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 28 6.1
03_05_0640 - 26326832-26327166,26327295-26327529,26327665-263279... 27 8.0
01_05_0208 - 19291953-19292552,19293027-19293134,19293231-192933... 27 8.0
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 166 bits (404), Expect = 1e-41
Identities = 82/124 (66%), Positives = 94/124 (75%)
Frame = +2
Query: 128 EHSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTG 307
EH+D A ++DNEAI L P T NLNRL+ Q++SS+TASLRFDGALNVD+
Sbjct: 196 EHTDVAVLLDNEAIYDICRRSLDIERPTYT-NLNRLVSQVISSLTASLRFDGALNVDVNE 254
Query: 308 VQTKLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRHGKYMV 487
QT LVPYPRIHF L +YAPVISAEKAYHEQLSVAEITN+ FEP + M KCDPRHGKYM
Sbjct: 255 FQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMA 314
Query: 488 WLLV 499
L+
Sbjct: 315 CCLM 318
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +3
Query: 66 QVSTAVVEAYNSILYNPHNPGNTPIVLSWSTMKPFYDIWPRNLDIERPT 212
QVST+VVE YNS+L +T + + + YDI R+LDIERPT
Sbjct: 176 QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDN-EAIYDICRRSLDIERPT 223
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 166 bits (404), Expect = 1e-41
Identities = 82/124 (66%), Positives = 94/124 (75%)
Frame = +2
Query: 128 EHSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTG 307
EH+D A ++DNEAI L P T NLNRL+ Q++SS+TASLRFDGALNVD+
Sbjct: 196 EHTDVAVLLDNEAIYDICRRSLDIERPTYT-NLNRLVSQVISSLTASLRFDGALNVDVNE 254
Query: 308 VQTKLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRHGKYMV 487
QT LVPYPRIHF L +YAPVISAEKAYHEQLSVAEITN+ FEP + M KCDPRHGKYM
Sbjct: 255 FQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMA 314
Query: 488 WLLV 499
L+
Sbjct: 315 CCLM 318
Score = 40.7 bits (91), Expect = 8e-04
Identities = 23/49 (46%), Positives = 30/49 (61%)
Frame = +3
Query: 66 QVSTAVVEAYNSILYNPHNPGNTPIVLSWSTMKPFYDIWPRNLDIERPT 212
QVST+VVE YNS+L +T + + + YDI R+LDIERPT
Sbjct: 176 QVSTSVVEPYNSVLSTHSLLEHTDVAVLLDN-EAIYDICRRSLDIERPT 223
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 165 bits (402), Expect = 2e-41
Identities = 83/124 (66%), Positives = 93/124 (75%)
Frame = +2
Query: 128 EHSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTG 307
EH+D A ++DNEAI L P T NLNRLI QI+SS+T SLRFDGA+NVD+T
Sbjct: 196 EHTDVAVLLDNEAIYDICRRSLDIERPTYT-NLNRLISQIISSLTTSLRFDGAINVDVTE 254
Query: 308 VQTKLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRHGKYMV 487
QT LVPYPRIHF L +YAPVISAEKAYHEQLSV EITNA FEP + M KCDPRHGKYM
Sbjct: 255 FQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMA 314
Query: 488 WLLV 499
L+
Sbjct: 315 CCLM 318
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = +3
Query: 66 QVSTAVVEAYNSILYNPHNPGNTPIVLSWSTMKPFYDIWPRNLDIERPT 212
QVSTAVVE YNS+L +T + + + YDI R+LDIERPT
Sbjct: 176 QVSTAVVEPYNSVLSTHSLLEHTDVAVLLDN-EAIYDICRRSLDIERPT 223
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 155 bits (377), Expect = 2e-38
Identities = 76/124 (61%), Positives = 90/124 (72%)
Frame = +2
Query: 128 EHSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTG 307
EH+D ++DNEAI L P T NLNRLI Q++SS+T SLRFDGA+NVD+T
Sbjct: 277 EHTDVVVLLDNEAIYDICKRSLDIERPTYT-NLNRLISQVISSLTTSLRFDGAINVDITE 335
Query: 308 VQTKLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRHGKYMV 487
QT LVPYPRIHF L +YAP+IS EKA+HEQ SV EITN+ FEP + M KCDPRHGKYM
Sbjct: 336 FQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMA 395
Query: 488 WLLV 499
L+
Sbjct: 396 CCLM 399
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +3
Query: 66 QVSTAVVEAYNSILYNPHNPGNTPIVLSWSTMKPFYDIWPRNLDIERPT 212
++STAVVE YNS+L +T +V+ + YDI R+LDIERPT
Sbjct: 257 KISTAVVEPYNSVLSTHSLIEHTDVVVLLDN-EAIYDICKRSLDIERPT 304
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 87.4 bits (207), Expect = 7e-18
Identities = 45/119 (37%), Positives = 67/119 (56%)
Frame = +2
Query: 128 EHSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTG 307
E++D ++DNEA+ L TP +LN LI +S +T LRF G LN DL
Sbjct: 374 ENADECMVLDNEALYDICFRTLKLTTPSFG-DLNHLISATMSGVTCCLRFPGQLNSDLRK 432
Query: 308 VQTKLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRHGKYM 484
+ L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+
Sbjct: 433 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYL 491
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 87.4 bits (207), Expect = 7e-18
Identities = 45/119 (37%), Positives = 67/119 (56%)
Frame = +2
Query: 128 EHSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTG 307
E++D ++DNEA+ L TP +LN LI +S +T LRF G LN DL
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFG-DLNHLISATMSGVTCCLRFPGQLNSDLRK 252
Query: 308 VQTKLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRHGKYM 484
+ L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYL 311
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 87.4 bits (207), Expect = 7e-18
Identities = 45/119 (37%), Positives = 67/119 (56%)
Frame = +2
Query: 128 EHSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTG 307
E++D ++DNEA+ L TP +LN LI +S +T LRF G LN DL
Sbjct: 215 ENADECMVLDNEALYDICFRTLKLTTPSFG-DLNHLISATMSGVTCCLRFPGQLNSDLRK 273
Query: 308 VQTKLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRHGKYM 484
+ L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+
Sbjct: 274 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYL 332
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 87.4 bits (207), Expect = 7e-18
Identities = 45/119 (37%), Positives = 67/119 (56%)
Frame = +2
Query: 128 EHSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTG 307
E++D ++DNEA+ L TP +LN LI +S +T LRF G LN DL
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFG-DLNHLISATMSGVTCCLRFPGQLNSDLRK 252
Query: 308 VQTKLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRHGKYM 484
+ L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYL 311
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 87.0 bits (206), Expect = 9e-18
Identities = 45/119 (37%), Positives = 67/119 (56%)
Frame = +2
Query: 128 EHSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTG 307
E++D ++DNEA+ L TP +LN LI +S +T LRF G LN DL
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLATPTFG-DLNHLISATMSGVTCCLRFPGQLNSDLRK 252
Query: 308 VQTKLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRHGKYM 484
+ L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYL 311
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 87.0 bits (206), Expect = 9e-18
Identities = 45/119 (37%), Positives = 67/119 (56%)
Frame = +2
Query: 128 EHSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTG 307
E++D ++DNEA+ L TP +LN LI +S +T LRF G LN DL
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLATPTFG-DLNHLISATMSGVTCCLRFPGQLNSDLRK 252
Query: 308 VQTKLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRHGKYM 484
+ L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYL 311
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 87.0 bits (206), Expect = 9e-18
Identities = 45/119 (37%), Positives = 67/119 (56%)
Frame = +2
Query: 128 EHSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTG 307
E++D ++DNEA+ L TP +LN LI +S +T LRF G LN DL
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLATPTFG-DLNHLISATMSGVTCCLRFPGQLNSDLRK 252
Query: 308 VQTKLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRHGKYM 484
+ L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+
Sbjct: 253 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYL 311
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 85.4 bits (202), Expect = 3e-17
Identities = 44/119 (36%), Positives = 66/119 (55%)
Frame = +2
Query: 128 EHSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTG 307
E++D ++DNEA+ L P +LN LI +S +T LRF G LN DL
Sbjct: 210 ENADECMVLDNEALYDICFRTLKLTNPSFG-DLNHLISATMSGVTCCLRFPGQLNSDLRK 268
Query: 308 VQTKLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRHGKYM 484
+ L+P+PR+HF +V +AP+ S + L+V E+T ++ N M DPRHG+Y+
Sbjct: 269 LAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYL 327
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 53.2 bits (122), Expect = 1e-07
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 131 HSDCAFMVDNEAIL*HLAA*LGY*TPDLTPNLNRLIGQIVSSITASLRFDGALNVDLTGV 310
++DC ++DN A+ L P N L+ ++S+ T +LR+ G +N DL G+
Sbjct: 198 NADCVVVLDNTALNRIAVERLHLANPTFAQT-NSLVSTVMSASTTTLRYPGYMNNDLVGL 256
Query: 311 QTKLVPYPRIHFPLVTYAPV-ISAEKAYHEQLSVAEITNACFEPXNQMVKCDPRH 472
L+P PR HF + Y P+ + + + +V ++ + N MV R+
Sbjct: 257 LASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARN 311
>03_01_0645 - 4731037-4731543,4731706-4731933
Length = 244
Score = 31.5 bits (68), Expect = 0.49
Identities = 25/105 (23%), Positives = 45/105 (42%)
Frame = -2
Query: 321 NLVWTPVRSTLRAPSKRREAVIDDTICPISRLRFGVRSGVQYPSYAARCHRMASLSTMKA 142
NL + P R ++ K R + ++ T P + + + ++ P+ A +A++
Sbjct: 138 NLTFEPRRVPIQEAKKHRSSAVETTTKPAAAVA-AEKLALELPAGGASREMVAAVC---- 192
Query: 141 QSECSQGCVGCKE*SCRLLQQQWTPGCASCRFRSPGIN*SRAPPP 7
+ C + C+E W P C +C+F P N S PPP
Sbjct: 193 -ARCHMLVMMCRE---------W-PACPNCKFVHPTANQSSPPPP 226
>05_01_0029 +
187769-188707,188971-189246,189978-190174,190263-190404,
190584-190862,190941-191013,191331-191379,192169-192433,
192576-192631,192777-192845,193028-193139,193682-193771,
193955-194125,194449-194506,194970-195128,195379-195401
Length = 985
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 300 RSTLRAPSKRREAVIDDTICPISRLRFGVRSGVQYPSYAARCHR 169
R T R + D++IC R R G + V YP + C+R
Sbjct: 863 RLTRLEERSRHVQLTDESICDSCRARLGTKLFVMYPDDSVVCYR 906
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 28.7 bits (61), Expect = 3.5
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 4/96 (4%)
Frame = +3
Query: 75 TAVVEAYNSILYNPHNPGNTPIVLSWSTMKPFYD----IWPRNLDIERPT*HRTSIGLSG 242
T+ + + S +Y+P +P +P LS+S P Y ++ PT +
Sbjct: 1644 TSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPVYNPTSSAYSPTSPSYNPTSPS 1703
Query: 243 KSYHRLPPLCVSTAPSMSI*RESRPNWCPTHVSISH 350
SY P T+PS S + P++ PT S ++
Sbjct: 1704 YSYSPTSPSYSPTSPSYSY-SPTSPSYSPTSPSYNY 1738
>05_06_0230 + 26585439-26586608
Length = 389
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 317 KLVPYPRI-HFPLVTYAPVISAEKAYHEQLSVAEITNAC 430
+L+ P + HFP + Y PV+ K H Q+S+ T +C
Sbjct: 93 RLLVLPNVTHFPDMVYPPVLGVVKRDH-QISIVAATLSC 130
>04_03_0208 + 12682369-12682543,12682858-12682889
Length = 68
Score = 28.3 bits (60), Expect = 4.6
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 303 VRSTLRAPSKRREAVIDDTICPISRLRFGVRSGVQYPSYAAR 178
+R R + REA + I++ R G R+GV++ YAAR
Sbjct: 1 MRRRRRGRLELREASASSSPHEINKRRLGARAGVRWRGYAAR 42
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 27.9 bits (59), Expect = 6.1
Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = +3
Query: 75 TAVVEAYNSILYNPHNPGNTPIVLSWSTMKPFYDIWPRNLDIERPT*HRTSIGLS--GKS 248
T+ V + S Y+P +P +P S+S P Y + P+ TS S S
Sbjct: 1644 TSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1703
Query: 249 YHRLPPLCVSTAPSMSI*RESRPNWCPTHVSIS 347
Y P T+P+ S + P + PT S S
Sbjct: 1704 YSPTSPSYSPTSPAYS---PTSPGYSPTSPSYS 1733
>03_05_0640 -
26326832-26327166,26327295-26327529,26327665-26327908,
26328389-26328507,26328860-26329050,26329133-26329220,
26331653-26331715,26331816-26333944,26334084-26334186
Length = 1168
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 283 RPQCRSNGSPDQIGALPTYPFPTGHVRSSHLCREGLPRAALCS 411
RP C S D A P +RSS +CR PRA+ C+
Sbjct: 16 RPGCAVRRSADSSPAAS--PCDLAALRSSVVCRNASPRASWCA 56
>01_05_0208 -
19291953-19292552,19293027-19293134,19293231-19293344,
19293464-19293573,19293720-19293808,19293942-19294138,
19294241-19294402,19294501-19294619,19294739-19294826,
19294911-19295016,19295157-19295245,19295351-19295503,
19295631-19295723,19295823-19295889,19296217-19296329,
19296453-19296548,19297963-19298139
Length = 826
Score = 27.5 bits (58), Expect = 8.0
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 9/94 (9%)
Frame = -2
Query: 345 KWIRG*GT---NLVWTPVRSTLRAPSKRREAVIDDTICPISRLRF--GVRSGVQYPSYAA 181
KW GT N +T ++T APS +AV+ D + + + G G +PSY A
Sbjct: 609 KWNGNNGTIPINRPFTWYKATFEAPSGE-DAVVVDLLGLNKGVAWVNGNNLGRYWPSYTA 667
Query: 180 R----CHRMASLSTMKAQSECSQGCVGCKE*SCR 91
CHR +A+ + ++ GC E S R
Sbjct: 668 AEMAGCHRCDYRGAFQAEGDGTRCLTGCGEPSQR 701
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,298,554
Number of Sequences: 37544
Number of extensions: 375255
Number of successful extensions: 1061
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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