Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_C05
(403 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0298 + 1998278-1998655,1998836-1999111,1999203-1999271,199... 32 0.20
07_01_1186 + 11266210-11266517,11266608-11266656 31 0.45
07_03_0072 - 13051145-13052362 29 1.4
07_03_1273 + 25369661-25369815,25369957-25370329,25371477-253715... 29 1.8
09_01_0117 + 1808669-1809181,1810038-1810059,1810170-1810223,181... 28 2.4
11_02_0038 - 7631462-7634428,7635975-7636250 28 3.2
01_01_0727 - 5675215-5675277,5675523-5675621,5676645-5676782,567... 28 3.2
09_06_0232 - 21737299-21739233 27 4.2
09_04_0506 - 18188785-18190599 27 4.2
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771... 27 4.2
06_02_0103 - 11829343-11829699,11831560-11831826,11832239-118325... 27 5.6
06_01_0191 + 1478267-1478929,1480579-1480789,1482625-1482925,148... 27 5.6
02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033 27 5.6
02_01_0060 - 434731-435879 27 5.6
01_01_0411 - 3096593-3097402 27 5.6
09_04_0296 + 16461482-16461544,16462087-16463097 27 7.3
07_03_1671 + 28512585-28513424 27 7.3
07_03_1490 - 26941322-26941417,26941850-26942377,26944590-269448... 27 7.3
07_03_1488 - 26925166-26925729,26927946-26928184,26929247-269296... 27 7.3
07_03_0156 - 14524757-14526403 27 7.3
04_04_1120 + 31037811-31038813,31038903-31038991,31039094-310391... 27 7.3
03_01_0414 + 3183292-3183735,3184547-3184969,3185435-3185535,318... 27 7.3
01_01_0905 + 7116121-7116236,7116285-7116339,7116948-7117005,711... 27 7.3
11_06_0062 + 19709801-19710832,19712383-19712568,19712661-197128... 26 9.7
10_08_0254 + 16236689-16236793,16237760-16237808,16237988-162380... 26 9.7
09_04_0286 + 16400695-16401369,16401473-16401658,16402115-164025... 26 9.7
07_03_1455 - 26659480-26659758,26659907-26660149 26 9.7
05_07_0058 + 27396639-27396874,27398501-27398559,27398937-27399016 26 9.7
02_04_0365 - 22384981-22385930,22386298-22386364,22386486-22386545 26 9.7
02_01_0069 + 491452-492594 26 9.7
>02_01_0298 +
1998278-1998655,1998836-1999111,1999203-1999271,
1999881-2000073,2000161-2000555
Length = 436
Score = 31.9 bits (69), Expect = 0.20
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -2
Query: 303 HPLRAALSSNPTLRRVPLAACLRRYGPGTLYGKTAPFKTNLDGRRDREKAEPPEHHISRR 124
HPL AA+++ R+ AC G GT + + DG + R++ E H+ RR
Sbjct: 18 HPLAAAIAAPHRRRKHDAVACRAAAGKGTSKARA----RDKDGSK-RQQRRALEEHLKRR 72
Query: 123 NRNG 112
R+G
Sbjct: 73 TRSG 76
>07_01_1186 + 11266210-11266517,11266608-11266656
Length = 118
Score = 30.7 bits (66), Expect = 0.45
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 210 RRGCQARSDGGRPREGLSSESGCLRVQP*VGGKLHLR 320
RRG +AR GGRP G +++ C R Q GG LR
Sbjct: 43 RRGAEARRGGGRPGRGRQAQAQC-RAQ--AGGSERLR 76
>07_03_0072 - 13051145-13052362
Length = 405
Score = 29.1 bits (62), Expect = 1.4
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = -1
Query: 343 IGLAVIFSLRWSLPPT*GCTLKQPDSEESPSRGLPPSLRAWHPLRENGPVQDELGRETRP 164
+GL+ + ++RWSLPP+ L+Q + E+ L + P R P ETR
Sbjct: 142 VGLSPVTAVRWSLPPSLLAALQQSEPLETTREKLRATDDT--PSRAAVPTFVTPTLETRR 199
Query: 163 RESGTSR 143
R+ G R
Sbjct: 200 RDQGRWR 206
>07_03_1273 +
25369661-25369815,25369957-25370329,25371477-25371577,
25371749-25371785
Length = 221
Score = 28.7 bits (61), Expect = 1.8
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 309 VYHPLRAALSSNPTLRRVPLAACLRRYGPGTLYGK-TAPFKTNLDGRRDR 163
+YH RA LRR P AA RR G + + TA T DGR R
Sbjct: 93 LYHVARARTFFAGVLRRRPAAAADRRRSAGDVLAELTAAAATTSDGRVGR 142
>09_01_0117 +
1808669-1809181,1810038-1810059,1810170-1810223,
1810684-1810892
Length = 265
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -1
Query: 163 RESGTSRTPHLPPQ*ERRDSVLGYIPVRSPLLRKS-WLVSFPPLTNMLKF 17
R S T R H PP R L P SPLL S + + P L L+F
Sbjct: 37 RASTTRRALHTPPHQRTRLPPLSVAPSASPLLNPSIHVAAAPSLGRSLRF 86
>11_02_0038 - 7631462-7634428,7635975-7636250
Length = 1080
Score = 27.9 bits (59), Expect = 3.2
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Frame = +3
Query: 96 PSTESRRSYCGGRCGVREVPLSRGLVSRPSSS*TGPFSRRGCQ-----ARSDGGRPREGL 260
P RS CGG GVR L R RP SS SR + R+ PR GL
Sbjct: 22 PPAAGSRSSCGGVVGVRVPNLHRQRFPRPRSSAPWASSRSSIRILIIILRARSVSPRSGL 81
Query: 261 S 263
+
Sbjct: 82 N 82
>01_01_0727 -
5675215-5675277,5675523-5675621,5676645-5676782,
5676878-5676995,5678177-5678520
Length = 253
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -3
Query: 263 GESLSRPASVATGLAPSTGKRPRSRRTWTGDETARKRNLP 144
G +RP ++++ AP + +PR+ R GD ++R P
Sbjct: 14 GGDAARPGTLSSLFAPRSSPKPRAPRPEPGDGPPQERRKP 53
>09_06_0232 - 21737299-21739233
Length = 644
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 114 RSYCGGRCGVREVPLSRGLVSRP--SSS*TGPFSRRGC 221
R+YC C +PL RG++ R + T PF + C
Sbjct: 83 RAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKAC 120
>09_04_0506 - 18188785-18190599
Length = 604
Score = 27.5 bits (58), Expect = 4.2
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = -2
Query: 249 AACLRRYGPGTLYGKTAPFKTNLDG----RRDREK-AEPPEHHISRRNRN 115
AA ++YG G +GK P + G RR+REK PP RR+R+
Sbjct: 466 AASDQQYGEGGSHGKERPPEREWSGASDRRREREKDLPPPPDWPERRHRD 515
>06_01_0993 +
7710016-7710977,7711081-7711316,7711422-7711501,
7711977-7712072,7712995-7713892,7713983-7714093,
7714657-7714751
Length = 825
Score = 27.5 bits (58), Expect = 4.2
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 21 LSILVSGGKETNQDFLSSGERTGI*PSTESRRSYCGGRCGVREVPLSRGLVSR 179
+ +L++G T Q SS RTG+ S E+R G C V E + L+ R
Sbjct: 287 VGVLINGFISTGQTSHSSDMRTGVYLSPENRAFTSVGLCDVDEKGVQYMLLCR 339
>06_02_0103 -
11829343-11829699,11831560-11831826,11832239-11832559,
11833783-11833844,11835413-11835446,11835539-11835619
Length = 373
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 260 ESLSRPASVATGLAPSTGKRPR 195
E+L+RP +V TG+AP K+ R
Sbjct: 154 EALARPTAVITGMAPEDLKKSR 175
>06_01_0191 +
1478267-1478929,1480579-1480789,1482625-1482925,
1483217-1483612,1483993-1484070,1484166-1484373
Length = 618
Score = 27.1 bits (57), Expect = 5.6
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Frame = -1
Query: 265 EESPSRGLPPSLRAWH---PLRENGPVQDELGRETRPRESGTSRTPHLPPQ*ERRDSVL- 98
E++ G PPS R E+ P + + +PR R H PP ERR ++
Sbjct: 74 EDAAEAGAPPSRRVPACDAGYSEHTPCEGQRWSLRQPRRRFAYRERHCPPPAERRRCLVP 133
Query: 97 ---GY-IPVRSPLLR-KSWLVSFP 41
GY P+R P R +W + P
Sbjct: 134 APRGYRAPLRWPRSRDAAWYANAP 157
>02_05_0706 + 31082924-31083010,31084208-31084576,31084645-31089033
Length = 1614
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 205 NGPVQDELGRETRPRESGTSRTPHLP 128
NGP DE G E PR + T +P
Sbjct: 1345 NGPTLDEAGTEHAPRSLSSKNTSSIP 1370
>02_01_0060 - 434731-435879
Length = 382
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 274 PDSEESPSRGLPPSLRAWHPLRENGP 197
PD E + GLPP +HP +GP
Sbjct: 47 PDDVEDAAGGLPPPAITFHPSSLSGP 72
>01_01_0411 - 3096593-3097402
Length = 269
Score = 27.1 bits (57), Expect = 5.6
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -3
Query: 251 SRPASVATGLAPSTGKRPRSRRTWTGDETARKRNLPNTTSP---AAIGTAGFSAGL 93
S PA L+P+T K+ ++ T D P+ T+P AA TAG G+
Sbjct: 203 STPAPAPAPLSPATKKKGKTPATSVADAPEAADATPDATTPSLAAARVTAGAGVGV 258
>09_04_0296 + 16461482-16461544,16462087-16463097
Length = 357
Score = 26.6 bits (56), Expect = 7.3
Identities = 20/80 (25%), Positives = 34/80 (42%)
Frame = -3
Query: 311 EFTTHLGLHSQATRL*GESLSRPASVATGLAPSTGKRPRSRRTWTGDETARKRNLPNTTS 132
E TTH HSQ E + A+ A P++ + + +++ AR R T
Sbjct: 153 ESTTHRRRHSQPPPQQPEDVDAAAAAAAAAPPNSKPKKKKKKSRPCFPGARLRP-RGTVP 211
Query: 131 PAAIGTAGFSAGLYSCSLAA 72
P ++G S ++C + A
Sbjct: 212 PPPPSSSGPSPATFACVVKA 231
>07_03_1671 + 28512585-28513424
Length = 279
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 260 ESLSRPASVATGLAPSTGKRPRSRRTWTG 174
+SL+R ++ + PS R RSRR W G
Sbjct: 203 DSLARAEAMFREVTPSGRTRARSRRCWRG 231
>07_03_1490 -
26941322-26941417,26941850-26942377,26944590-26944828,
26945891-26946318,26946728-26946837
Length = 466
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 152 NLPNTTS-PAAIGTAGFSAGLYSCSLAATEEILVSFFSSAY 33
N P T P G + ++CS AT EIL+S S++
Sbjct: 312 NRPETICIPGDYGAVDITLSRFNCSAEATVEILISEVQSSF 352
>07_03_1488 -
26925166-26925729,26927946-26928184,26929247-26929674,
26930084-26930193
Length = 446
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -3
Query: 152 NLPNTTS-PAAIGTAGFSAGLYSCSLAATEEILVSFFSSAY 33
N P T P G + ++CS AT EIL+S S++
Sbjct: 312 NRPETICIPGDYGAVDITLSRFNCSAEATVEILISEVQSSF 352
>07_03_0156 - 14524757-14526403
Length = 548
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 160 LAVSSPVQVRLERGRFPVEGARPVATEAGRERDSPQSRVA*EC 288
+ + SP V+ GR V+ R + G+ERD + + EC
Sbjct: 436 ILIESPSNVQTRPGRHSVDVVRGDESRRGKERDYRRPAASSEC 478
>04_04_1120 +
31037811-31038813,31038903-31038991,31039094-31039163,
31039270-31039353,31039452-31039528,31039631-31039712,
31039847-31039929,31040270-31040333,31040435-31040566,
31040674-31040777,31040901-31040996,31041144-31041251
Length = 663
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 173 DETARKRNLPNTTSPAAIGTAGFSAGLYSCSLAATEEILV 54
+ET L N T P+A+ T F L + + AA +E++V
Sbjct: 139 EETPDMAFLANITVPSALVTKQFGDALRAAASAADDEVVV 178
>03_01_0414 +
3183292-3183735,3184547-3184969,3185435-3185535,
3186178-3187439,3187625-3187665,3187777-3187845,
3187975-3188075,3188413-3188491,3188570-3188668,
3188757-3188825,3188918-3188967,3189211-3189387,
3189496-3189634
Length = 1017
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 234 RYGPGTLYGKTAPFKTNLDGRRDREKAEP 148
R GT++ + K N DG++D +K P
Sbjct: 657 RIPTGTVHNQAKEHKENFDGKQDNKKLHP 685
>01_01_0905 +
7116121-7116236,7116285-7116339,7116948-7117005,
7117637-7117731,7117823-7117926,7118310-7118438,
7118845-7120633,7120849-7121054,7121865-7121949,
7122183-7122422
Length = 958
Score = 26.6 bits (56), Expect = 7.3
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -1
Query: 265 EESPSRGLPPSLRAWHPLRENGPVQDELGRETRP 164
++SP +PPSL + + ++ P + GR+ P
Sbjct: 472 DQSPQMSVPPSLICSNAMTDDAPFDNRPGRKEMP 505
>11_06_0062 +
19709801-19710832,19712383-19712568,19712661-19712867,
19712940-19713078,19713172-19713380,19713520-19714134
Length = 795
Score = 26.2 bits (55), Expect = 9.7
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 190 DELGRETRPRESGTSRTPHLP 128
+++ R TRP++ SR+PH P
Sbjct: 19 EKVRRWTRPKKGSVSRSPHYP 39
>10_08_0254 +
16236689-16236793,16237760-16237808,16237988-16238076,
16238178-16238234,16238684-16238746,16238828-16238893,
16239520-16239606,16239691-16239784,16240351-16240673,
16241022-16241048,16241065-16241145,16241445-16241476,
16242126-16242266,16242455-16242516,16243170-16243387
Length = 497
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -1
Query: 304 PPT*GCTLKQPDSEESPSRGLPPSLRAWHP----LRENGPVQDELGRETRPRESGTSRTP 137
PPT G P + +PP ++ P +++ P+Q G+ P ++ T P
Sbjct: 227 PPTQGLANGAPVPRPFSNGAVPPQIQHVRPPPPPMQQFPPMQMN-GQPVWPPQN-TQLPP 284
Query: 136 HLPPQ*ERRDSV 101
H+PPQ R +V
Sbjct: 285 HMPPQMHYRPAV 296
>09_04_0286 +
16400695-16401369,16401473-16401658,16402115-16402575,
16402678-16402836,16402914-16403265,16403360-16403653
Length = 708
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 88 EYSPALNPAVPIAAGDVVFGRFRFLAVSSP 177
+Y+PAL+P + G++ F LA +SP
Sbjct: 157 DYAPALSPRSEVGGGELAFELDENLAEASP 186
>07_03_1455 - 26659480-26659758,26659907-26660149
Length = 173
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Frame = -1
Query: 229 RAWHPLRENGPVQDELGRETRPRES-GTSRTPHLPPQ*ERRDSVLGYIPVRSPL 71
+ W P +EN P + E RP+E T R P R + P PL
Sbjct: 42 KMWFPPKENSPRKGERYPRQRPQEGYDTRRCSRCRPGDHRNPAASSLHPTAPPL 95
>05_07_0058 + 27396639-27396874,27398501-27398559,27398937-27399016
Length = 124
Score = 26.2 bits (55), Expect = 9.7
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = -3
Query: 260 ESLSRPASVATGLAPSTGKRPRSRRT----WTGDETARKRNL 147
+ LSR +A L S+G+ +R+ WTGD K+NL
Sbjct: 61 QDLSRLRMMAARLRESSGRLGNTRKLKEIIWTGDPEDHKKNL 102
>02_04_0365 - 22384981-22385930,22386298-22386364,22386486-22386545
Length = 358
Score = 26.2 bits (55), Expect = 9.7
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = -3
Query: 245 PASVATGLAPSTGKRP--RSRRTWTGDETARKRNLPNTTS----PAAIGTAGFSAGLYS 87
PAS +T + P S R W+ D+ R ++LP+ + PA++G + G+ S
Sbjct: 212 PASCPVPANAATRQEPIKSSTRAWSPDDAFRPQSLPSLSKQVSFPASMGNCWVAMGIGS 270
>02_01_0069 + 491452-492594
Length = 380
Score = 26.2 bits (55), Expect = 9.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = -1
Query: 352 LFAIGLAVIFSLRWSLPPT*GCTLKQPDSEESPSRGLPPSLRAWHP 215
L+ + + +FS S P + PD E + GLPP +HP
Sbjct: 22 LYRVAASALFS---SPPRRQAANVLDPDDVEDAAGGLPPPAITFHP 64
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,221,399
Number of Sequences: 37544
Number of extensions: 290974
Number of successful extensions: 1029
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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