Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_C02
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58757-2|AAC47915.2| 402|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear recep... 29 2.9
AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear horm... 29 2.9
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 28 6.8
Z82278-9|CAE17877.1| 323|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z82070-8|CAE17980.1| 323|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 27 9.0
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 27 9.0
AF047658-1|AAC04418.2| 348|Caenorhabditis elegans Hypothetical ... 27 9.0
>U58757-2|AAC47915.2| 402|Caenorhabditis elegans Hypothetical
protein C01B10.3 protein.
Length = 402
Score = 33.1 bits (72), Expect = 0.18
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +1
Query: 343 NLHSVKNYEAIRFLDIFEKTFVQSLQKGKFESYGKKIDFHDEKAINFVGNYWQENADLYE 522
NL+ KN+ I++ D F T +++ G S G + D N G + D Y
Sbjct: 93 NLYLFKNHSDIQYYDRFSSTGYINVRSGHQHSIGS--NECDGFIQNTFGQNYTFRRDFYN 150
Query: 523 EEVTKDY--QRSYEIVARHVLGASTKPFDKHNLHA 621
++ T+D QR+ ++AR + F NLH+
Sbjct: 151 DDGTRDLANQRTGFLLARFRIHGKELTFVNLNLHS 185
>Z81579-9|CAN99688.1| 225|Caenorhabditis elegans Hypothetical
protein R13H4.2a protein.
Length = 225
Score = 31.1 bits (67), Expect = 0.73
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +1
Query: 67 LTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRY 213
L +D ++ YYY+ + ++ S RY + Y+N Y TRY
Sbjct: 71 LYDDYWYDKYYYFSPLYRSTYYPSRRYSYSDYLPNPYYWNNYGSYWTRY 119
>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
protein F48F5.1 protein.
Length = 1291
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 434 NRMARKLISTMKRQLTLSETIG--KRTPICMKKKLQRIINDLMKLSLAMCSVPALNHSTS 607
+++ + T K SET+ K+ P MKK ++ + +L K S ++ A++HS S
Sbjct: 498 DKLLESVQQTAKSVSQFSETLASVKKIPDAMKKNVKNVTLELNKRSESLNQSDAISHSAS 557
>AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear receptor
NHR-92 protein.
Length = 362
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 463 RGNQFSCHTIRICLSVGTVRKSFQKCPRT 377
RG+++ C + CL V T+R +KC T
Sbjct: 43 RGHEYRCKQMENCLIVSTIRNMCKKCRYT 71
>AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 92 protein.
Length = 354
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 463 RGNQFSCHTIRICLSVGTVRKSFQKCPRT 377
RG+++ C + CL V T+R +KC T
Sbjct: 35 RGHEYRCKQMENCLIVSTIRNMCKKCRYT 63
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 460 HDEKAINFVGNYWQENADLYEEEV 531
HDE A+N Y+Q + DL E++V
Sbjct: 75 HDELAVNNADEYFQGDVDLSEQQV 98
>Z82278-9|CAE17877.1| 323|Caenorhabditis elegans Hypothetical
protein W04E12.9 protein.
Length = 323
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = +1
Query: 286 YYPLMTSYYFPFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSLQKGKFESYGKKIDFHD 465
Y P + S + F P ++NL+ + F+ T + + +K K E++ ++ H
Sbjct: 3 YLPSLPSLFLYFYDHPSSHNLYIYLHL----FVQSNTTTIISNFRKQKHENHSSEVSMHQ 58
Query: 466 EK 471
+
Sbjct: 59 HR 60
>Z82070-8|CAE17980.1| 323|Caenorhabditis elegans Hypothetical
protein W04E12.9 protein.
Length = 323
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = +1
Query: 286 YYPLMTSYYFPFAQRPDNYNLHSVKNYEAIRFLDIFEKTFVQSLQKGKFESYGKKIDFHD 465
Y P + S + F P ++NL+ + F+ T + + +K K E++ ++ H
Sbjct: 3 YLPSLPSLFLYFYDHPSSHNLYIYLHL----FVQSNTTTIISNFRKQKHENHSSEVSMHQ 58
Query: 466 EK 471
+
Sbjct: 59 HR 60
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 395 KRLSYSPYRKANSNRMARKLISTMKRQLTLSETIGKRTPICMKKKLQRIINDL 553
KR+ N+ R ++ + +M+ L +ET K + +KKKL+ INDL
Sbjct: 1587 KRIQEKEEEFENTRRNHQRALESMQATLE-AETKQKEEALRIKKKLESDINDL 1638
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 395 KRLSYSPYRKANSNRMARKLISTMKRQLTLSETIGKRTPICMKKKLQRIINDL 553
KR+ N+ R ++ + +M+ L +ET K + +KKKL+ INDL
Sbjct: 1587 KRIQEKEEEFENTRRNHQRALESMQATLE-AETKQKEEALRIKKKLESDINDL 1638
>AF047658-1|AAC04418.2| 348|Caenorhabditis elegans Hypothetical
protein K03H6.2 protein.
Length = 348
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 115 HLPFWWSSERYGNLKHRRGEIYYNFYQQLTTRYY 216
HLPF + + + H R EI+YN + + Y+
Sbjct: 264 HLPFQYELVDHDKMYHHRTEIWYNNDMSIGSSYH 297
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,444,520
Number of Sequences: 27780
Number of extensions: 326079
Number of successful extensions: 864
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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