Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_B24
(381 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 178 2e-46
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 169 1e-43
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 103 7e-24
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 76 2e-15
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.19
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 27 0.75
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 27 0.75
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 27 0.99
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 26 1.7
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 3.0
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 25 3.0
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 25 4.0
SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 25 5.3
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 25 5.3
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa... 24 7.0
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual 24 9.3
SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomy... 24 9.3
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 24 9.3
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 24 9.3
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 24 9.3
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 178 bits (434), Expect = 2e-46
Identities = 78/126 (61%), Positives = 96/126 (76%)
Frame = +3
Query: 3 QPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPE 182
QP+G M + D F+TFFSETG GK+VPR+++VDLEP V+D+VRTG YR LFHPE
Sbjct: 31 QPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPE 90
Query: 183 QLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXX 362
QLITGKEDA+NNYARGHYT+GKE+VD V D+IR++AD C+GLQGFL+FH
Sbjct: 91 QLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTGSGFG 150
Query: 363 XLLMER 380
LL+ER
Sbjct: 151 ALLLER 156
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 169 bits (412), Expect = 1e-43
Identities = 71/111 (63%), Positives = 90/111 (81%)
Frame = +3
Query: 48 DDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 227
+D F TFFSETG GK VPR+++VDLEP V+D+VRTG Y+ LFHPEQ++TGKEDA+NNYAR
Sbjct: 50 NDGFGTFFSETGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYAR 109
Query: 228 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMER 380
GHYT+GKE++D VL+RIR++AD C+GLQGFL+FH LL+ER
Sbjct: 110 GHYTVGKEMIDSVLERIRRMADNCSGLQGFLVFHSFGGGTGSGLGALLLER 160
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 103 bits (248), Expect = 7e-24
Identities = 46/110 (41%), Positives = 66/110 (60%)
Frame = +3
Query: 51 DSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 230
+ N +F+E GK+VPRAV VDLEP +D V++G + LF P+ +I G+ A N +A+G
Sbjct: 45 ERLNVYFNEAAGGKYVPRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKG 104
Query: 231 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMER 380
HYT G E+ D VLD +R+ A+ C LQGF + H LL+ +
Sbjct: 105 HYTEGAELADAVLDVVRREAEACDALQGFQLTHSLGGGTGSGMGTLLLSK 154
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 75.8 bits (178), Expect = 2e-15
Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Frame = +3
Query: 6 PDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQ 185
PDG + + T G D + FF ++ +++PRA+ +DLEP VV+ + + TY L++PE
Sbjct: 33 PDGTLESFAT--EGVDRKDVFFYQSDDTRYIPRAILIDLEPRVVNNILSDTYGSLYNPEN 90
Query: 186 LITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXX 359
++ K A NN+A G Y+ + I + ++D I + AD L+GF + H
Sbjct: 91 ILITKNGGGAGNNWANG-YSHAERIFEDIMDMIDREADGSDSLEGFSLLHSIAGGTGSGL 149
Query: 360 XXLLMER 380
L+ER
Sbjct: 150 GSFLLER 156
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.5 bits (63), Expect = 0.19
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +1
Query: 22 QLTRPSGVET-TPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LS 192
Q+T P+ V + TP T SS L S+ P+ SSSILN +T S++ ++ + ++ L+
Sbjct: 371 QITSPTAVNSSTPITSSSV---LNSSTPITSSSILNTSTPITSSSVLNSSTPITSSSILN 427
Query: 193 LVRRMPQTTMLVVTTPL 243
+ +T+L +TP+
Sbjct: 428 SSTPITSSTVLNSSTPI 444
Score = 28.3 bits (60), Expect = 0.43
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 1269 STPITSSTA---LNTSIPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 1325
Query: 229 VTT 237
V T
Sbjct: 1326 VNT 1328
Score = 27.5 bits (58), Expect = 0.75
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 501 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 557
Query: 229 VTT 237
V T
Sbjct: 558 VNT 560
Score = 27.5 bits (58), Expect = 0.75
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 2613 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 2669
Query: 229 VTT 237
V T
Sbjct: 2670 VNT 2672
Score = 27.5 bits (58), Expect = 0.75
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 2841 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 2897
Query: 229 VTT 237
V T
Sbjct: 2898 VNT 2900
Score = 27.5 bits (58), Expect = 0.75
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 2937 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 2993
Query: 229 VTT 237
V T
Sbjct: 2994 VNT 2996
Score = 27.1 bits (57), Expect = 0.99
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T SS L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 993 STPITSSSV---LNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTV 1049
Query: 229 VTT 237
V T
Sbjct: 1050 VNT 1052
Score = 26.6 bits (56), Expect = 1.3
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 1773 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 1829
Query: 229 VTT 237
V T
Sbjct: 1830 VNT 1832
Score = 25.8 bits (54), Expect = 2.3
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ S I ++ +L P T+ V
Sbjct: 3381 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTV 3437
Query: 229 V--TTPL 243
V +TP+
Sbjct: 3438 VNSSTPI 3444
Score = 25.4 bits (53), Expect = 3.0
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T SS L S+ P+ SSSILN S+ S I ++ +L P T+ V
Sbjct: 405 STPITSSSV---LNSSTPITSSSILNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSV 461
Query: 229 V--TTPL 243
+ +TP+
Sbjct: 462 LNSSTPI 468
Score = 25.4 bits (53), Expect = 3.0
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TM 222
+TP T SS L S+ P+ SSS+LN S+ A S I ++ L P T T
Sbjct: 633 STPITSSSV---LNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTA 689
Query: 223 LVVTTPL 243
L +TP+
Sbjct: 690 LNTSTPI 696
Score = 25.4 bits (53), Expect = 3.0
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TM 222
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T T
Sbjct: 681 STPITSSTA---LNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSVLNSSTPITSSTA 737
Query: 223 LVVTTPL 243
L +TP+
Sbjct: 738 LNTSTPI 744
Score = 25.4 bits (53), Expect = 3.0
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T SS L S+ P+ SSS+LN S+ S I ++ +L P T+ V
Sbjct: 981 STPITSSSV---LNSSTPITSSSVLNTSTPITSSSVLNSSTAITSSTALNTSTPITSSSV 1037
Query: 229 V--TTPL 243
+ +TP+
Sbjct: 1038 LNSSTPI 1044
Score = 25.4 bits (53), Expect = 3.0
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ S I ++ L P T+ V
Sbjct: 1065 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTV 1121
Query: 229 VTT 237
V T
Sbjct: 1122 VNT 1124
Score = 25.4 bits (53), Expect = 3.0
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T SS L S+ P+ SSS+LN S+ S I ++ +L +P T+ V
Sbjct: 1233 STPITSSSI---LNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSV 1289
Query: 229 V--TTPL 243
+ +TP+
Sbjct: 1290 LNSSTPI 1296
Score = 25.4 bits (53), Expect = 3.0
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ S I ++ +L P T+ V
Sbjct: 1605 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTV 1661
Query: 229 V--TTPL 243
V +TP+
Sbjct: 1662 VNSSTPI 1668
Score = 25.4 bits (53), Expect = 3.0
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 225
+TP T S+A L ++ P+ SSS+LN +T S++ +T S I ++ L P T+
Sbjct: 1965 STPITSSTA---LNTSTPITSSSVLNSSTPITSSSVLNT-STPITSSSVLNSSTPITSST 2020
Query: 226 VVTT 237
VV T
Sbjct: 2021 VVNT 2024
Score = 25.4 bits (53), Expect = 3.0
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 225
+TP T S+A L ++ P+ SSS+LN +T S + +T S I ++ L P T+
Sbjct: 2301 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSST 2356
Query: 226 VVTT 237
VV T
Sbjct: 2357 VVNT 2360
Score = 25.4 bits (53), Expect = 3.0
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 225
+TP T S+A L ++ P+ SSS+LN +T S + +T S I ++ L P T+
Sbjct: 2709 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSST 2764
Query: 226 VVTT 237
VV T
Sbjct: 2765 VVNT 2768
Score = 25.0 bits (52), Expect = 4.0
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+ + S+ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 837 STPITSSTV---VNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 893
Query: 229 VTT 237
V T
Sbjct: 894 VNT 896
Score = 25.0 bits (52), Expect = 4.0
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+ + S+ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 2445 STPITSSTV---VNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 2501
Query: 229 VTT 237
V T
Sbjct: 2502 VNT 2504
Score = 24.6 bits (51), Expect = 5.3
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ S I ++ L P T+ V
Sbjct: 729 STPITSSTA---LNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTV 785
Query: 229 VTT 237
V T
Sbjct: 786 VNT 788
Score = 24.6 bits (51), Expect = 5.3
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 225
+TP T S+A L ++ P+ SSS+LN +T S + +T S I ++ + P T+
Sbjct: 1125 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPITSST 1180
Query: 226 VVTT 237
VV T
Sbjct: 1181 VVNT 1184
Score = 24.6 bits (51), Expect = 5.3
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 SNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFI 177
S+ +V S ST ++ L S+ P+ SSS+LN +T S + +T S I
Sbjct: 1370 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT-STPI 1428
Query: 178 QNNLSLVRRMPQTTMLVVTT 237
++ + P T+ VV T
Sbjct: 1429 TSSTVVNSSTPITSSTVVNT 1448
Score = 24.6 bits (51), Expect = 5.3
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTM 222
+TP T SS L S+ P+ SSS+LN +T S + +T + ++ ++ + +T
Sbjct: 1533 STPITSSSV---LNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTA 1589
Query: 223 LVVTTPL 243
L +TP+
Sbjct: 1590 LNTSTPI 1596
Score = 24.6 bits (51), Expect = 5.3
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TM 222
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T T+
Sbjct: 1581 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 1637
Query: 223 LVVTTPL 243
L +TP+
Sbjct: 1638 LNSSTPI 1644
Score = 24.6 bits (51), Expect = 5.3
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TM 222
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T T
Sbjct: 1749 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTA 1805
Query: 223 LVVTTPL 243
L +TP+
Sbjct: 1806 LNTSTPI 1812
Score = 24.6 bits (51), Expect = 5.3
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TM 222
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T T+
Sbjct: 1845 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 1901
Query: 223 LVVTTPL 243
L +TP+
Sbjct: 1902 LNSSTPI 1908
Score = 24.6 bits (51), Expect = 5.3
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TM 222
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T T+
Sbjct: 2037 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 2093
Query: 223 LVVTTPL 243
L +TP+
Sbjct: 2094 LNSSTPI 2100
Score = 24.6 bits (51), Expect = 5.3
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ S I ++ + P T+ V
Sbjct: 2157 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTV 2213
Query: 229 VTT 237
V T
Sbjct: 2214 VNT 2216
Score = 24.6 bits (51), Expect = 5.3
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 1 SNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFI 177
S+ +V S ST ++ L S+ P+ SSS+LN +T S + +T S I
Sbjct: 2210 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT-STPI 2268
Query: 178 QNNLSLVRRMPQTTMLVVTT 237
++ + P T+ VV T
Sbjct: 2269 TSSTVVNSSTPITSSTVVNT 2288
Score = 24.6 bits (51), Expect = 5.3
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 58 STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVT 234
ST ++ L S+ P+ SSS+LN +T S + +T S I ++ L P T+ VV
Sbjct: 3225 STAITSSSVLNSSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSSTVVN 3283
Query: 235 T 237
T
Sbjct: 3284 T 3284
Score = 24.2 bits (50), Expect = 7.0
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTM 222
+TP T SS L S+ P+ SSS+LN +T S + +T + + ++ + +T
Sbjct: 453 STPITSSSV---LNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTA 509
Query: 223 LVVTTPL 243
L +TP+
Sbjct: 510 LNTSTPI 516
Score = 24.2 bits (50), Expect = 7.0
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ S I ++ +L P T+ V
Sbjct: 1869 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSV 1925
Query: 229 V--TTPL 243
+ +TP+
Sbjct: 1926 LNSSTPI 1932
Score = 24.2 bits (50), Expect = 7.0
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTM 222
+TP T SS L S+ P+ SSS+LN +T S + ++ + ++ L+ + +T
Sbjct: 1917 STPITSSSV---LNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTA 1973
Query: 223 LVVTTPL 243
L +TP+
Sbjct: 1974 LNTSTPI 1980
Score = 24.2 bits (50), Expect = 7.0
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ S I ++ +L P T+ V
Sbjct: 2061 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSV 2117
Query: 229 V--TTPL 243
+ +TP+
Sbjct: 2118 LNSSTPI 2124
Score = 24.2 bits (50), Expect = 7.0
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTM 222
+TP T SS L S+ P+ SSS+LN +T S + ++ + ++ L+ + +T
Sbjct: 2109 STPITSSSV---LNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSSTPITSSTA 2165
Query: 223 LVVTTPL 243
L +TP+
Sbjct: 2166 LNTSTPI 2172
Score = 24.2 bits (50), Expect = 7.0
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +1
Query: 25 LTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLV 198
+T + V T+ S SS+ L S+ P+ SSS+LN +T S + ++ + ++ L+
Sbjct: 2412 ITSSTVVNTSTSITSSS--VLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVLNSS 2469
Query: 199 RRMPQTTMLVVTTPL 243
+ +T L +TP+
Sbjct: 2470 TPITSSTALNTSTPI 2484
Score = 24.2 bits (50), Expect = 7.0
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+ L ++ P+ SSS+LN S+ S I ++ L P T+ V
Sbjct: 3201 STPITSSTT---LNTSTPITSSSVLNSSTAITSSSVLNSSTPITSSSVLNSSTPITSSTV 3257
Query: 229 VTT 237
V T
Sbjct: 3258 VNT 3260
Score = 23.8 bits (49), Expect = 9.3
Identities = 20/74 (27%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = +1
Query: 37 SGVETTP---STRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVR 201
S TTP ST+ ++ + S+ P+ SSS+LN +T S++ +T + ++ L+
Sbjct: 359 SFANTTPENTSTQITSPTAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSVLNSST 418
Query: 202 RMPQTTMLVVTTPL 243
+ +++L +TP+
Sbjct: 419 PITSSSILNSSTPI 432
Score = 23.8 bits (49), Expect = 9.3
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+A L ++ P+ SSS+LN S+ S I ++ +L P T+ V
Sbjct: 621 STPITSSTA---LNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSV 677
Query: 229 V--TTPL 243
+ +TP+
Sbjct: 678 LNSSTPI 684
Score = 23.8 bits (49), Expect = 9.3
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 225
+TP T S+ L S+ P+ SSS+LN +T S + +T S I ++ +L P T+
Sbjct: 1089 STPITSSTV---LNSSTPITSSSVLNSSTPITSSTVVNT-STPITSSTALNTSTPITSSS 1144
Query: 226 VV--TTPL 243
V+ +TP+
Sbjct: 1145 VLNSSTPI 1152
Score = 23.8 bits (49), Expect = 9.3
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T SS L S+ P+ SSS+LN S+ S I ++ + P T+ V
Sbjct: 1977 STPITSSSV---LNSSTPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTV 2033
Query: 229 V--TTPL 243
V +TP+
Sbjct: 2034 VNSSTPI 2040
Score = 23.8 bits (49), Expect = 9.3
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 49 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 228
+TP T S+ + S+ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 2133 STPITSSTV---VNSSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTV 2189
Query: 229 V--TTPL 243
V +TP+
Sbjct: 2190 VNSSTPI 2196
Score = 23.8 bits (49), Expect = 9.3
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +1
Query: 1 SNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQ 180
S+ +V S ST ++ L S+ P+ SSS+LN S+ A S I
Sbjct: 2798 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALNTSTPIT 2857
Query: 181 NNLSLVRRMPQTTMLVVTT 237
++ L P T+ + T
Sbjct: 2858 SSSVLNSSTPITSSTALNT 2876
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 27.5 bits (58), Expect = 0.75
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = -2
Query: 374 HEERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYDFLSNGVVTTSIVVCGILLT 195
HE+ + +TG ++ +++E ++A D E+QV + S G + VV LL
Sbjct: 108 HEKPARPQTGEGSDNEDEDEDIDALIEDLYSQDQEEEQVEEEESPGPAGAAKVVPEELLE 167
Query: 194 SDKLFWMKQLSV 159
+D + + + V
Sbjct: 168 TDPKYGLTESEV 179
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.5 bits (58), Expect = 0.75
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 22 QLTRPSGVETTPSTRSSARPELASTFPVPSSS 117
Q +PSGVE T ++R++A+ + ST + S +
Sbjct: 42 QAVKPSGVEPTNTSRANAQKKTESTGKITSEA 73
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 27.1 bits (57), Expect = 0.99
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 82 ELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV 231
E+ F VP +S LNP S +TD +++ N+ + R+ T +++
Sbjct: 218 EVKDLFYVPLTSFLNPKHQKISRFRNTDLLYVEFNIDKIPRIWGITAVIL 267
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 26.2 bits (55), Expect = 1.7
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 34 PSGVETTPSTRSSARPELASTFPV 105
P+ VETTPST +SA + + F +
Sbjct: 350 PANVETTPSTATSAPKKSTAPFAI 373
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 3.0
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +1
Query: 1 SNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN 126
S+L ++PS T+ ST SSA P S+ + SSS+++
Sbjct: 176 SSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVS 217
>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 3.0
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -2
Query: 278 DAVEDQVYDFLSNGVVT-TSIVVC 210
DA DQ+ +++ NG++T T IV C
Sbjct: 68 DATIDQLQNYMENGILTSTDIVHC 91
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 25.0 bits (52), Expect = 4.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 142 RSALAHTDSCFIQNNLSLVRRMPQT 216
+S + HT++ NN SL+RR+ T
Sbjct: 605 KSLIQHTNNLLQSNNASLLRRLAAT 629
>SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 649
Score = 24.6 bits (51), Expect = 5.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 198 KEDAANNYARGHYTIGKEIVDLV 266
+E ANN+ RGH I K+ D +
Sbjct: 599 RERKANNFFRGHIEIDKKTKDFL 621
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 24.6 bits (51), Expect = 5.3
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -2
Query: 377 LHEERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYDFLS-NGVV 231
LH + + + ++ ED+ +C ++S AD + + L+ NG++
Sbjct: 1078 LHSQPIQNVSDVNNKKDEDDHEQTSCLIISGIADVFSENMSLLLNVNGIL 1127
>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 669
Score = 24.2 bits (50), Expect = 7.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 200 LTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEERVEGVVST 42
L D+L + L + SA + G+ D+D NV+A G ++R E + T
Sbjct: 327 LLYDQLTPITPLMLALSAGTPAFRGYLADQDCRWNVIA--GAVDDRTEEEMKT 377
>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 23.8 bits (49), Expect = 9.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 222 ARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 311
A GH +G E+V D +RK ++ T L+
Sbjct: 183 AEGHPDVGVELVRAGADTLRKDSENHTALE 212
>SPAC1687.11 |spb1||rRNA methyltransferase Spb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 23.8 bits (49), Expect = 9.3
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 99 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIV 257
PR VF +++ V T ++FHPE+ ++ + YA YT+ K ++
Sbjct: 214 PRTVFEEVQEPV-----TNVDAKVFHPEK----RKRSREGYADDDYTLHKTVL 257
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 23.8 bits (49), Expect = 9.3
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 189 ITGKEDAANNYARGHYTIGKEIVDLVL 269
IT + NN GH T+G + V L L
Sbjct: 883 ITDFSRSVNNQRNGHLTVGSDAVCLSL 909
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 23.8 bits (49), Expect = 9.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 282 CGCGRGPSLRFPFQWCS 232
C CG+ +LRFP CS
Sbjct: 43 CYCGKDRNLRFPDLQCS 59
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 23.8 bits (49), Expect = 9.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 22 QLTRPSGVETTPSTRSSARPELASTF 99
Q T PSG +TPST + +L T+
Sbjct: 117 QFTTPSGPVSTPSTYVATYNDLPCTY 142
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,677,034
Number of Sequences: 5004
Number of extensions: 35366
Number of successful extensions: 203
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 124270298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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