Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_B15
         (620 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81449-6|CAB03764.2|  489|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z81449-5|CAB03762.2|  488|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z68749-3|CAA92958.1|  288|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF244356-1|AAF70462.1|  288|Caenorhabditis elegans long chain po...    29   2.7  
Z99710-9|CAN99658.1|  402|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z99710-8|CAB16868.1|  383|Caenorhabditis elegans Hypothetical pr...    28   4.7  
EF015633-1|ABK20307.1|  383|Caenorhabditis elegans alpha 1,2-fuc...    28   4.7  
Z49128-1|CAA88953.1|  379|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF047662-7|AAC04439.1|  955|Caenorhabditis elegans Hypothetical ...    28   6.2  

>Z81449-6|CAB03764.2|  489|Caenorhabditis elegans Hypothetical
           protein C46F11.5b protein.
          Length = 489

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/48 (29%), Positives = 29/48 (60%)
 Frame = +3

Query: 303 INYFCTYYHYIYSKILLSIITVYLETKYITFICFKINSLLSYISSFLF 446
           +++F ++  Y+   I+  ++TVY  TKYI    + +  L++Y+  F+F
Sbjct: 145 VSWFGSWIQYL---IITPVVTVYEYTKYIVLFRW-VPPLIAYVKHFIF 188


>Z81449-5|CAB03762.2|  488|Caenorhabditis elegans Hypothetical
           protein C46F11.5a protein.
          Length = 488

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/48 (29%), Positives = 29/48 (60%)
 Frame = +3

Query: 303 INYFCTYYHYIYSKILLSIITVYLETKYITFICFKINSLLSYISSFLF 446
           +++F ++  Y+   I+  ++TVY  TKYI    + +  L++Y+  F+F
Sbjct: 145 VSWFGSWIQYL---IITPVVTVYEYTKYIVLFRW-VPPLIAYVKHFIF 188


>Z68749-3|CAA92958.1|  288|Caenorhabditis elegans Hypothetical
           protein F56H11.4 protein.
          Length = 288

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 379 PNISHLFVLKSTLYLAIYLHFFL*PYELIAG 471
           P++  L V   T YLA++++FFL  Y L  G
Sbjct: 245 PSVFKLAVFMDTTYLALFVNFFLQSYVLRGG 275


>AF244356-1|AAF70462.1|  288|Caenorhabditis elegans long chain
           polyunsaturated fattyacid elongation enzyme protein.
          Length = 288

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 379 PNISHLFVLKSTLYLAIYLHFFL*PYELIAG 471
           P++  L V   T YLA++++FFL  Y L  G
Sbjct: 245 PSVFKLAVFMDTTYLALFVNFFLQSYVLRGG 275


>Z99710-9|CAN99658.1|  402|Caenorhabditis elegans Hypothetical
           protein F08A8.5b protein.
          Length = 402

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 211 NYL*HFESKLE*TSTIYMIFAIKYSASLILNYVQKNN 101
           NYL +F   L   + IY+I  I   +S IL Y QKN+
Sbjct: 6   NYLMYFCLVLGIFANIYVIIKITLGSSHILEYFQKNS 42


>Z99710-8|CAB16868.1|  383|Caenorhabditis elegans Hypothetical
           protein F08A8.5a protein.
          Length = 383

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 211 NYL*HFESKLE*TSTIYMIFAIKYSASLILNYVQKNN 101
           NYL +F   L   + IY+I  I   +S IL Y QKN+
Sbjct: 6   NYLMYFCLVLGIFANIYVIIKITLGSSHILEYFQKNS 42


>EF015633-1|ABK20307.1|  383|Caenorhabditis elegans alpha
           1,2-fucosyltransferase protein.
          Length = 383

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 211 NYL*HFESKLE*TSTIYMIFAIKYSASLILNYVQKNN 101
           NYL +F   L   + IY+I  I   +S IL Y QKN+
Sbjct: 6   NYLMYFCLVLGIFANIYVIIKITLGSSHILEYFQKNS 42


>Z49128-1|CAA88953.1|  379|Caenorhabditis elegans Hypothetical
           protein M03C11.1 protein.
          Length = 379

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 471 NKNNCLKHCVKVRLLRERSLCEEMYCNAIVVVWFT 575
           NK  C++  V   ++RE +L  +M    IV +W+T
Sbjct: 60  NKRRCIEKGVAANVIRELTLLSKMSHPFIVNLWYT 94


>AF047662-7|AAC04439.1|  955|Caenorhabditis elegans Hypothetical
            protein T22B2.1 protein.
          Length = 955

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +3

Query: 483  CLKHCVKVRLLRERSLCEEMYCNAIVVVWFTILKVC*VTCIA 608
            CL+  VK +   + S C+  Y    V  WF I ++C  TC A
Sbjct: 903  CLEDMVKNQDTVKCSTCKRQYHTTCVQKWFKIKRIC-PTCNA 943


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,551,401
Number of Sequences: 27780
Number of extensions: 210873
Number of successful extensions: 555
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 553
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)