Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_B13
         (261 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25286-1|AAA58429.1| 1388|Homo sapiens alpha-1 type XV collagen ...    30   1.5  
L25280-1|AAC78500.1| 1388|Homo sapiens type XV collagen protein.       30   1.5  
AL354923-1|CAI12548.2| 1388|Homo sapiens collagen type XV alpha ...    30   1.5  
AL136084-3|CAI17044.2| 1388|Homo sapiens collagen type XV alpha ...    30   1.5  
Y09022-1|CAA70220.1|  438|Homo sapiens Not56-like protein protein.     27   8.2  
BC004313-1|AAH04313.1|  433|Homo sapiens ALG3 protein protein.         27   8.2  
BC002839-1|AAH02839.1|  438|Homo sapiens asparagine-linked glyco...    27   8.2  

>L25286-1|AAA58429.1| 1388|Homo sapiens alpha-1 type XV collagen
           protein.
          Length = 1388

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 157 ISTEMLIKNPKIPPGPPSLP 216
           + +E L++ P  PPGPP LP
Sbjct: 611 VGSEQLLRGPPGPPGPPGLP 630


>L25280-1|AAC78500.1| 1388|Homo sapiens type XV collagen protein.
          Length = 1388

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 157 ISTEMLIKNPKIPPGPPSLP 216
           + +E L++ P  PPGPP LP
Sbjct: 611 VGSEQLLRGPPGPPGPPGLP 630


>AL354923-1|CAI12548.2| 1388|Homo sapiens collagen type XV alpha 1
           protein.
          Length = 1388

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 157 ISTEMLIKNPKIPPGPPSLP 216
           + +E L++ P  PPGPP LP
Sbjct: 611 VGSEQLLRGPPGPPGPPGLP 630


>AL136084-3|CAI17044.2| 1388|Homo sapiens collagen type XV alpha 1
           protein.
          Length = 1388

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 157 ISTEMLIKNPKIPPGPPSLP 216
           + +E L++ P  PPGPP LP
Sbjct: 611 VGSEQLLRGPPGPPGPPGLP 630


>Y09022-1|CAA70220.1|  438|Homo sapiens Not56-like protein protein.
          Length = 438

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +1

Query: 13  LAQNVVSCLYLSYVFITLIIYHK 81
           +AQN+ + LYL+ + +  +IYH+
Sbjct: 123 MAQNIFAVLYLATLLLVFLIYHQ 145


>BC004313-1|AAH04313.1|  433|Homo sapiens ALG3 protein protein.
          Length = 433

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +1

Query: 13  LAQNVVSCLYLSYVFITLIIYHK 81
           +AQN+ + LYL+ + +  +IYH+
Sbjct: 118 MAQNIFAVLYLATLLLVFLIYHQ 140


>BC002839-1|AAH02839.1|  438|Homo sapiens asparagine-linked
           glycosylation 3 homolog (S. cerevisiae,
           alpha-1,3-mannosyltra protein.
          Length = 438

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +1

Query: 13  LAQNVVSCLYLSYVFITLIIYHK 81
           +AQN+ + LYL+ + +  +IYH+
Sbjct: 123 MAQNIFAVLYLATLLLVFLIYHQ 145


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,737,046
Number of Sequences: 237096
Number of extensions: 507912
Number of successful extensions: 2447
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2443
length of database: 76,859,062
effective HSP length: 64
effective length of database: 61,684,918
effective search space used: 1357068196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)