Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_B11
         (565 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93382-2|CAB07612.2|  639|Caenorhabditis elegans Hypothetical pr...    32   0.33 
Z74037-2|CAD36492.1|  441|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z74037-1|CAA98492.1|  510|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z66561-1|CAA91454.1|  635|Caenorhabditis elegans Hypothetical pr...    27   7.0  

>Z93382-2|CAB07612.2|  639|Caenorhabditis elegans Hypothetical
           protein F45G2.3 protein.
          Length = 639

 Score = 31.9 bits (69), Expect = 0.33
 Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = -2

Query: 378 EQRIPPPLVQTGCCTSDLAPRTHLLKYPGLKHY--APIRLVESEQ*KTATTSR*TSLLCA 205
           E+  PPP+++    T D A +TH  + P L H   AP  L +    K A TS+  S   +
Sbjct: 517 EELKPPPILRKAVSTPDSARKTHKFQSPLLNHQNSAPPSLPDR---KPAQTSKYFSKPTS 573

Query: 204 KRGKPTNK 181
           + G P  K
Sbjct: 574 ENGVPKTK 581


>Z74037-2|CAD36492.1|  441|Caenorhabditis elegans Hypothetical
           protein F57B7.1b protein.
          Length = 441

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 399 DNATLVDPDYWDLDVFEPTIADYDKFDLTLTKRISSYSDKKLFAV 533
           +  T +DP +W+   + P IAD  K +  L  R+S +    +F V
Sbjct: 187 ETCTDLDPMFWNSPAYLPGIADIAKANSCLVFRLSYWISGMVFKV 231


>Z74037-1|CAA98492.1|  510|Caenorhabditis elegans Hypothetical
           protein F57B7.1a protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 399 DNATLVDPDYWDLDVFEPTIADYDKFDLTLTKRISSYSDKKLFAV 533
           +  T +DP +W+   + P IAD  K +  L  R+S +    +F V
Sbjct: 187 ETCTDLDPMFWNSPAYLPGIADIAKANSCLVFRLSYWISGMVFKV 231


>Z66561-1|CAA91454.1|  635|Caenorhabditis elegans Hypothetical
           protein F08G12.1 protein.
          Length = 635

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +3

Query: 402 NATLVDPDYWDLDVFEPTI-ADYDKFDLTLTKRISSYSDKK 521
           N + +   Y +LD ++ T  ADYD F   + ++   Y+DKK
Sbjct: 256 NKSEIVSSYHELDCYQETPEADYDTFIELVNQKRREYADKK 296


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,763,185
Number of Sequences: 27780
Number of extensions: 223719
Number of successful extensions: 445
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)