Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_B08
(308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0096 + 12328116-12329561,12329810-12329852,12332119-123322... 31 0.24
12_01_0656 - 5554906-5555194,5555640-5556178 29 0.56
08_01_0758 - 7193287-7193871,7193965-7194421,7194437-7194655,719... 29 0.56
11_06_0333 - 22430180-22430707 28 1.3
08_02_0406 + 16813099-16813166,16813914-16814480,16814549-168145... 28 1.3
01_01_0697 - 5389071-5389487,5390301-5390390,5390472-5390536,539... 28 1.7
09_04_0038 - 13996505-13996836,13997047-13997077,13997307-139974... 27 2.3
02_05_0743 + 31425827-31425888,31426733-31426759,31426840-314269... 27 2.3
09_03_0025 - 11665969-11666417,11666490-11666594,11666667-116668... 27 4.0
08_01_0331 + 2966362-2966477,2966561-2966924,2966949-2967050,296... 27 4.0
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817 27 4.0
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164... 27 4.0
05_07_0326 + 29274287-29274428,29274577-29275379 27 4.0
04_01_0305 - 4141692-4142912 27 4.0
04_04_0372 + 24781572-24781612,24781696-24782413 26 5.2
12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055 26 6.9
06_01_0432 - 3073380-3074474,3075922-3075989,3076467-3076773 26 6.9
05_01_0486 - 4047055-4049013 26 6.9
03_06_0700 + 35616619-35617069,35619123-35619502 26 6.9
08_02_1132 - 24530921-24532906 25 9.2
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827... 25 9.2
01_06_0278 - 28111655-28112531,28113896-28114029,28114131-281149... 25 9.2
>09_03_0096 +
12328116-12329561,12329810-12329852,12332119-12332237,
12333326-12333853
Length = 711
Score = 30.7 bits (66), Expect = 0.24
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 35 EKKLDAIERRVEKIETRKQRGEPEDESVSKGVVKDLEALAGDIKRLEDAYSRVASTRGI 211
E+ L E+ K E+ K E E + + + DIKRLED +R+ + G+
Sbjct: 547 EENLALAEQEHAKRESAKANAERRLEEIRQKTEVESRCFKDDIKRLEDELARLQKSMGV 605
>12_01_0656 - 5554906-5555194,5555640-5556178
Length = 275
Score = 29.5 bits (63), Expect = 0.56
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 IEKKLDAIERRVEKIETRKQRGEPEDESVSKGVVKDLEALAGDI-KRLED 178
IE KLD + RR+E+ E R++ + + + ++ +EA ++ K+ +D
Sbjct: 3 IEDKLDLLLRRIEEYELRREEADRRTRADIRSLIDVVEACTPEVGKKAKD 52
>08_01_0758 -
7193287-7193871,7193965-7194421,7194437-7194655,
7194881-7195419
Length = 599
Score = 29.5 bits (63), Expect = 0.56
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 32 IEKKLDAIERRVEKIETRKQRGEPEDESVSKGVVKDLEALAGDI-KRLED 178
IE KLD + RR+E+ E R++ + + + ++ +EA ++ K+ +D
Sbjct: 3 IEDKLDLLLRRIEEYELRREEADRRTRADIRSLIDVVEACTPEVGKKAKD 52
>11_06_0333 - 22430180-22430707
Length = 175
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 98 EPEDESVSKGVVKDLEALAGDIKRLEDAYSRVASTRG 208
E DE K + D ++ G+ KRL+ A + AST G
Sbjct: 15 EVSDEEEVKAIAADAGSVTGEGKRLDAAAAATASTAG 51
>08_02_0406 +
16813099-16813166,16813914-16814480,16814549-16814595,
16814787-16815484
Length = 459
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 27 RKSRRNLMR*RGGWRRSRQESSEGSPKTRAFRKV 128
RK ++ +++ GG+ S +ESS+G+P + A R+V
Sbjct: 299 RKKKKGVVQIAGGFSAS-EESSDGTPTSPALRRV 331
>01_01_0697 -
5389071-5389487,5390301-5390390,5390472-5390536,
5391106-5391176,5391297-5391335,5392938-5393350
Length = 364
Score = 27.9 bits (59), Expect = 1.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 60 GGWRRSRQESSEGSPKTRAFR 122
GGWRR R ++ EG+ RA R
Sbjct: 55 GGWRRRRGDAGEGAEAGRAVR 75
>09_04_0038 -
13996505-13996836,13997047-13997077,13997307-13997420,
13997546-13997686,13997787-13997851,13997943-13998039,
13998096-13998257,13998360-13998473,14001263-14001311,
14001967-14002047,14003504-14003561,14003671-14004031,
14004129-14004213,14004320-14004591,14004712-14004914,
14005419-14005494
Length = 746
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 56 ERRVEKIETRKQRGEPEDESVSKGVVKDLEALA 154
ER ++K E KQR E+ S + +KD + +A
Sbjct: 609 ERDIKKAEMEKQRKHAEEVSAASAALKDGDVIA 641
>02_05_0743 +
31425827-31425888,31426733-31426759,31426840-31426962,
31427252-31427492,31427655-31427780
Length = 192
Score = 27.5 bits (58), Expect = 2.3
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +2
Query: 113 SVSKGVVKDLEALAGDIKRLEDAYSRVASTRGIELR 220
S K VVK+L+ LAG I L AY AS R IE +
Sbjct: 7 SFLKVVVKNLDVLAGPIVSL--AYPLYASVRAIETK 40
>09_03_0025 -
11665969-11666417,11666490-11666594,11666667-11666856,
11666933-11667120,11667240-11667571,11667654-11667940,
11668027-11668911
Length = 811
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = +2
Query: 23 LPKIEKKLDAIERRVEKIETRKQRGEPEDESVSKGVVKDLEALAGDIKRLEDAYSRVAS 199
+ ++ ++++A+ER ++ ++ E E + L G IKRLE A VA+
Sbjct: 633 MEQMARQIEALERDKTELAAQRDSALKEVEDRKIKSQAQFDVLVGKIKRLEGARDDVAN 691
>08_01_0331 +
2966362-2966477,2966561-2966924,2966949-2967050,
2967127-2967209,2967306-2967422,2968085-2968187,
2968259-2968928,2969239-2969393,2969529-2969580,
2969734-2969825
Length = 617
Score = 26.6 bits (56), Expect = 4.0
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +2
Query: 35 EKKLDAIERRVEKIETRKQRGEPEDESVSKGVVKDLEA 148
+++ + + ++K++ R Q E E E GV++DL +
Sbjct: 281 QQRFEKAKELIKKLKARVQDLEKEQEEKENGVIRDLRS 318
>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
Length = 958
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 30 KSRRNLMR*RGGWRRSRQESSEGSPKTRA 116
K R+ + RGGW RSR+ S ++R+
Sbjct: 168 KRSRSPLSPRGGWNRSRRNRSRSRSRSRS 196
>08_01_0207 -
1647168-1647251,1647583-1647726,1648176-1648287,
1648392-1648573,1648649-1648780,1648900-1649856,
1649949-1650734
Length = 798
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/70 (20%), Positives = 34/70 (48%)
Frame = +2
Query: 2 AELATSLLPKIEKKLDAIERRVEKIETRKQRGEPEDESVSKGVVKDLEALAGDIKRLEDA 181
A + +S++ +IE + ++ +ET+ + + + V+ KD+E + +K L+D
Sbjct: 562 ANVRSSMIGEIENRSSHLQAIKADVETQGEFVKSLIKEVTNAAYKDIEDVVAFVKWLDDE 621
Query: 182 YSRVASTRGI 211
+ R +
Sbjct: 622 LGFLVDERAV 631
>05_07_0326 + 29274287-29274428,29274577-29275379
Length = 314
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 5 ELATSLLPKIEKKLDAIERRVEKIETRKQRGEPEDESVSKGVVKDLEALAGDIKR 169
E A K++++ +AI + T +++ EP + G V D E+LA +KR
Sbjct: 185 EAAAKKTKKLQEE-EAIAKHKPATTTERKQAEPTTAAPLPGHVVDRESLAEKVKR 238
>04_01_0305 - 4141692-4142912
Length = 406
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 74 IETRKQRGEPEDESVSKGVVKDLEALAGDIKRLEDAYSRVASTRGIE 214
+E +K + E++ +G VK+++A +KR D AS G+E
Sbjct: 355 VEAKKAKSRSNQETL-RGEVKEIQAAMDFVKRDNDKLWLEASEAGVE 400
>04_04_0372 + 24781572-24781612,24781696-24782413
Length = 252
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 60 GGWRRSRQESSEGSPKTRAFRKVS*KIWRRSQGISSGWKTLTA 188
GG RSR SS+ SP + +V IW++ G +G T A
Sbjct: 22 GGAARSRGVSSKKSPWYQRAVEVLLLIWKQPTGAGTGTTTKAA 64
>12_01_0001 + 1777-1935,2002-2109,2492-2560,2652-2836,3040-3055
Length = 178
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 107 DESVSKGVVKDLEALAGDIKRLEDAYSRVASTRG 208
D +VS +K+L + GD+KR Y R ++G
Sbjct: 80 DYAVSNEDIKELFSEVGDVKRYSINYDRSGRSKG 113
>06_01_0432 - 3073380-3074474,3075922-3075989,3076467-3076773
Length = 489
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 199 GSHTAVSVFQPLDIPCERLQIFHDTFRN 116
G T SVF +D+ E++++FH+ N
Sbjct: 430 GYATYPSVFMAMDVQVEKVKVFHEKRMN 457
>05_01_0486 - 4047055-4049013
Length = 652
Score = 25.8 bits (54), Expect = 6.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 135 KIWRRSQGISSGWKTLTAVWL 197
++WR +G S GWK++ WL
Sbjct: 408 RVWRTIKGTSEGWKSV--AWL 426
>03_06_0700 + 35616619-35617069,35619123-35619502
Length = 276
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 196 SHTAVSVFQPLDIPCERLQIF-HDTFRNAL 110
SHT V + + LD+P E L + ++ R L
Sbjct: 95 SHTVVQILRSLDVPFETLDVLANEALRQGL 124
>08_02_1132 - 24530921-24532906
Length = 661
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +3
Query: 126 VS*KIWRRSQGISSGWKT---LTAVWLP 200
VS ++W+ +G S GW++ LTA + P
Sbjct: 414 VSVRLWKTIKGTSEGWRSVSWLTACFFP 441
>02_05_0684 -
30880527-30880753,30881952-30882124,30882687-30882754,
30882860-30882973,30883281-30883438,30883516-30883654,
30883851-30883907,30884064-30884140,30884324-30884462,
30884590-30884668,30885047-30885174,30885269-30885352,
30886072-30886191,30886274-30886375,30886470-30886617,
30887404-30887749,30887851-30887968,30888309-30888370,
30888798-30888947,30889049-30889169,30889269-30889319,
30889427-30889567
Length = 933
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/53 (20%), Positives = 30/53 (56%)
Frame = +2
Query: 32 IEKKLDAIERRVEKIETRKQRGEPEDESVSKGVVKDLEALAGDIKRLEDAYSR 190
++++++ +RR ++++ R + + E +KG E G +K L++ +S+
Sbjct: 521 VQRRMER-QRREDEVKNRSSKKAQDAEQSNKGSGTGSEQSGGALKSLKEKFSQ 572
>01_06_0278 -
28111655-28112531,28113896-28114029,28114131-28114992,
28115636-28115735,28115848-28115939,28116031-28116122
Length = 718
Score = 25.4 bits (53), Expect = 9.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 86 KQRGEPEDESVSKGVVKDLEALAGDIKRLEDA 181
K +G+ EDE +KG DL+ G K L+ A
Sbjct: 487 KTKGKLEDECKTKGNADDLQMEGGSWKWLKSA 518
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,583,144
Number of Sequences: 37544
Number of extensions: 67010
Number of successful extensions: 379
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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