Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_B06
         (117 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07956-1|AAA58642.1|  702|Homo sapiens 1,4-alpha-glucan branchin...    62   4e-10
BC012098-1|AAH12098.1|  702|Homo sapiens glucan (1,4-alpha-), br...    62   4e-10
AB209731-1|BAD92968.1|  754|Homo sapiens Glucan , branching enzy...    62   4e-10

>L07956-1|AAA58642.1|  702|Homo sapiens 1,4-alpha-glucan branching
           enzyme protein.
          Length = 702

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 25/38 (65%), Positives = 34/38 (89%)
 Frame = +2

Query: 2   SHDQALVGDKTIAFWLMDATMYSHMSTISEPSPVVERG 115
           SHDQALVGDK++AFWLMDA MY++MS ++  +PV++RG
Sbjct: 479 SHDQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRG 516


>BC012098-1|AAH12098.1|  702|Homo sapiens glucan (1,4-alpha-),
           branching enzyme 1 (glycogen branching enzyme, Andersen
           di protein.
          Length = 702

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 25/38 (65%), Positives = 34/38 (89%)
 Frame = +2

Query: 2   SHDQALVGDKTIAFWLMDATMYSHMSTISEPSPVVERG 115
           SHDQALVGDK++AFWLMDA MY++MS ++  +PV++RG
Sbjct: 479 SHDQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRG 516


>AB209731-1|BAD92968.1|  754|Homo sapiens Glucan , branching enzyme
           1 variant protein.
          Length = 754

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 25/38 (65%), Positives = 34/38 (89%)
 Frame = +2

Query: 2   SHDQALVGDKTIAFWLMDATMYSHMSTISEPSPVVERG 115
           SHDQALVGDK++AFWLMDA MY++MS ++  +PV++RG
Sbjct: 531 SHDQALVGDKSLAFWLMDAEMYTNMSVLTPFTPVIDRG 568


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,385,134
Number of Sequences: 237096
Number of extensions: 239740
Number of successful extensions: 471
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 471
length of database: 76,859,062
effective HSP length: 19
effective length of database: 72,354,238
effective search space used: 1374730522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)