BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_B06
(117 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069319-1|AAL39464.1| 463|Drosophila melanogaster LD03583p pro... 68 2e-12
AE013599-1650|AAF58416.2| 685|Drosophila melanogaster CG33138-P... 68 2e-12
M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lo... 26 8.4
AY128468-1|AAM75061.1| 1593|Drosophila melanogaster RE21811p pro... 26 8.4
AF017777-5|AAC28409.1| 1597|Drosophila melanogaster small optic ... 26 8.4
AE014298-3124|AAS65412.1| 1000|Drosophila melanogaster CG1391-PC... 26 8.4
AE014298-3123|AAS65411.1| 1240|Drosophila melanogaster CG1391-PD... 26 8.4
AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB... 26 8.4
>AY069319-1|AAL39464.1| 463|Drosophila melanogaster LD03583p
protein.
Length = 463
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +2
Query: 2 SHDQALVGDKTIAFWLMDATMYSHMSTISEPSPVVERG 115
SHDQALVGDKTIAFWLMD MY+HMST+S+ S +++RG
Sbjct: 242 SHDQALVGDKTIAFWLMDKEMYTHMSTLSDSSVIIDRG 279
>AE013599-1650|AAF58416.2| 685|Drosophila melanogaster CG33138-PA
protein.
Length = 685
Score = 67.7 bits (158), Expect = 2e-12
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +2
Query: 2 SHDQALVGDKTIAFWLMDATMYSHMSTISEPSPVVERG 115
SHDQALVGDKTIAFWLMD MY+HMST+S+ S +++RG
Sbjct: 464 SHDQALVGDKTIAFWLMDKEMYTHMSTLSDSSVIIDRG 501
>M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lobes
protein protein.
Length = 1597
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 91 FAYCAHVTVHSCVHQPKCNRLISH 20
F C+H T+ + +H P C+ SH
Sbjct: 751 FWTCSHCTLKNSLHSPVCSACKSH 774
>AY128468-1|AAM75061.1| 1593|Drosophila melanogaster RE21811p
protein.
Length = 1593
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 91 FAYCAHVTVHSCVHQPKCNRLISH 20
F C+H T+ + +H P C+ SH
Sbjct: 747 FWTCSHCTLKNSLHSPVCSACKSH 770
>AF017777-5|AAC28409.1| 1597|Drosophila melanogaster small optic
lobes protein.
Length = 1597
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 91 FAYCAHVTVHSCVHQPKCNRLISH 20
F C+H T+ + +H P C+ SH
Sbjct: 751 FWTCSHCTLKNSLHSPVCSACKSH 774
>AE014298-3124|AAS65412.1| 1000|Drosophila melanogaster CG1391-PC,
isoform C protein.
Length = 1000
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 91 FAYCAHVTVHSCVHQPKCNRLISH 20
F C+H T+ + +H P C+ SH
Sbjct: 154 FWTCSHCTLKNSLHSPVCSACKSH 177
>AE014298-3123|AAS65411.1| 1240|Drosophila melanogaster CG1391-PD,
isoform D protein.
Length = 1240
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 91 FAYCAHVTVHSCVHQPKCNRLISH 20
F C+H T+ + +H P C+ SH
Sbjct: 394 FWTCSHCTLKNSLHSPVCSACKSH 417
>AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB,
isoform B protein.
Length = 1594
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 91 FAYCAHVTVHSCVHQPKCNRLISH 20
F C+H T+ + +H P C+ SH
Sbjct: 748 FWTCSHCTLKNSLHSPVCSACKSH 771
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,179,484
Number of Sequences: 53049
Number of extensions: 74402
Number of successful extensions: 195
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 24,988,368
effective HSP length: 19
effective length of database: 23,980,437
effective search space used: 455628303
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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