Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_B06
         (117 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       20   3.2  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    19   7.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    18   9.7  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 46  VDGRNYVQSHEHN 84
           VD R Y +SH H+
Sbjct: 697 VDEREYPESHGHD 709


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +1

Query: 52  GRNYVQSHEHNKRTESC 102
           GR Y+   ++N+  E C
Sbjct: 546 GRTYLFDLDYNESEEQC 562


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 17  LVGDKTIAFW 46
           LVGD ++A W
Sbjct: 319 LVGDTSLACW 328


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,428
Number of Sequences: 438
Number of extensions: 392
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 19
effective length of database: 138,021
effective search space used:  2622399
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)