Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_B05
         (580 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL445489-3|CAM14433.1| 1176|Homo sapiens crumbs homolog 2 (Droso...    30   6.8  
AL365504-2|CAM21391.1| 1176|Homo sapiens crumbs homolog 2 (Droso...    30   6.8  
AK123000-1|BAC85516.1| 1176|Homo sapiens  3 (HIVEP3).  protein.        30   6.8  
AK096230-1|BAC04733.1|  253|Homo sapiens protein ( Homo sapiens ...    30   6.8  
AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven...    29   9.0  
AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven...    29   9.0  
AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven...    29   9.0  
AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo ...    29   9.0  

>AL445489-3|CAM14433.1| 1176|Homo sapiens crumbs homolog 2
            (Drosophila) protein.
          Length = 1176

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = -1

Query: 568  PCQCGLTRA*SARRYPLK-PPG--AVRCIWDGGDTGWLSQAP 452
            PC  G        R+  + PPG    RC WDG   GW + AP
Sbjct: 1102 PCARGRCHTHPDGRFECRCPPGFGGPRCRWDGWAGGWAANAP 1143


>AL365504-2|CAM21391.1| 1176|Homo sapiens crumbs homolog 2
            (Drosophila) protein.
          Length = 1176

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = -1

Query: 568  PCQCGLTRA*SARRYPLK-PPG--AVRCIWDGGDTGWLSQAP 452
            PC  G        R+  + PPG    RC WDG   GW + AP
Sbjct: 1102 PCARGRCHTHPDGRFECRCPPGFGGPRCRWDGWAGGWAANAP 1143


>AK123000-1|BAC85516.1| 1176|Homo sapiens  3 (HIVEP3).  protein.
          Length = 1176

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
 Frame = -1

Query: 568  PCQCGLTRA*SARRYPLK-PPG--AVRCIWDGGDTGWLSQAP 452
            PC  G        R+  + PPG    RC WDG   GW + AP
Sbjct: 1102 PCARGRCHTHPDGRFECRCPPGFGGPRCRWDGWAGGWAANAP 1143


>AK096230-1|BAC04733.1|  253|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38911 fis, clone NT2NE2007220. ).
          Length = 253

 Score = 29.9 bits (64), Expect = 6.8
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = +3

Query: 438 CRGRR--GACESHPVSPPSQMQRTAPGGFSG 524
           C  RR    C+SHP   P+      PGGF G
Sbjct: 218 CGSRRPSSVCDSHPPPTPAHFWEHLPGGFGG 248


>AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG
           seven-pass G-type receptor 1 (flamingo homolog,
           Drosophila) protein.
          Length = 3014

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 7/36 (19%)
 Frame = +1

Query: 421 LPGGFAAGGDAVLAKAT-------PCRPHPKCSGRP 507
           +PGG AA   + LA  T       P RP P+C GRP
Sbjct: 135 VPGGCAAAQHSALAAPTTLPACRCPPRPRPRCPGRP 170


>AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG
           seven-pass G-type receptor 1 (flamingo homolog,
           Drosophila) protein.
          Length = 3014

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 7/36 (19%)
 Frame = +1

Query: 421 LPGGFAAGGDAVLAKAT-------PCRPHPKCSGRP 507
           +PGG AA   + LA  T       P RP P+C GRP
Sbjct: 135 VPGGCAAAQHSALAAPTTLPACRCPPRPRPRCPGRP 170


>AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG
           seven-pass G-type receptor 1 (flamingo homolog,
           Drosophila) protein.
          Length = 3014

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 7/36 (19%)
 Frame = +1

Query: 421 LPGGFAAGGDAVLAKAT-------PCRPHPKCSGRP 507
           +PGG AA   + LA  T       P RP P+C GRP
Sbjct: 135 VPGGCAAAQHSALAAPTTLPACRCPPRPRPRCPGRP 170


>AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo 2
           protein.
          Length = 3014

 Score = 29.5 bits (63), Expect = 9.0
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 7/36 (19%)
 Frame = +1

Query: 421 LPGGFAAGGDAVLAKAT-------PCRPHPKCSGRP 507
           +PGG AA   + LA  T       P RP P+C GRP
Sbjct: 135 VPGGCAAAQHSALAAPTTLPACRCPPRPRPRCPGRP 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,910,494
Number of Sequences: 237096
Number of extensions: 2066162
Number of successful extensions: 4648
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4644
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5985693436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)