Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_B04
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 234 2e-62
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 234 2e-62
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 234 2e-62
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 154 4e-38
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 154 4e-38
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 107 3e-24
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 103 5e-23
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 4e-14
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 64 5e-11
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 64 5e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 58 5e-09
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 48 4e-06
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 45 4e-05
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 43 1e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 41 4e-04
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 41 4e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 40 0.001
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 37 0.007
U53148-5|AAB37076.1| 130|Caenorhabditis elegans Ribosomal prote... 36 0.022
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.029
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 33 0.088
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 33 0.15
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 33 0.15
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 32 0.20
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 1.4
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 2.5
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 29 2.5
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 29 2.5
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 28 3.3
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 28 3.3
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 28 4.4
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 4.4
Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical pr... 27 7.6
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 7.6
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 97
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 98 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 157
Query: 141 LSLS 130
+L+
Sbjct: 158 KTLT 161
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 173
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 174 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 233
Query: 141 LSLS 130
+L+
Sbjct: 234 KTLT 237
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 249
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 250 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 309
Query: 141 LSLS 130
+L+
Sbjct: 310 KTLT 313
Score = 234 bits (572), Expect = 3e-62
Identities = 116/123 (94%), Positives = 117/123 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 325
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 326 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 385
Query: 141 LSL 133
+L
Sbjct: 386 KTL 388
Score = 232 bits (567), Expect = 1e-61
Identities = 115/124 (92%), Positives = 117/124 (94%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL GKTITLEVE SD
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASD 401
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 402 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 461
Query: 141 LSLS 130
+L+
Sbjct: 462 KTLT 465
Score = 175 bits (425), Expect = 2e-44
Identities = 85/86 (98%), Positives = 85/86 (98%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 418 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 477
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAG 244
TIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 478 TIENVKAKIQDKEGIPPDQQRLIFAG 503
Score = 155 bits (375), Expect = 2e-38
Identities = 77/85 (90%), Positives = 79/85 (92%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 204 IQKESTLHLVLRLRGGN*AFYLSLS 130
IQKESTLHLVLRLRGG F +L+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
Score = 49.6 bits (113), Expect = 1e-06
Identities = 19/36 (52%), Positives = 28/36 (77%)
Frame = -3
Query: 424 GIYSSLGAPSQRWNANIREDPHWQDHHARGGAIRHY 317
G+YSS GAPSQR A++R+D W++HH+RG + H+
Sbjct: 503 GVYSSFGAPSQRRYADLRQDFDWKNHHSRGRSFGHH 538
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 97
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 98 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 157
Query: 141 LSLS 130
+L+
Sbjct: 158 KTLT 161
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 173
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 174 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 233
Query: 141 LSLS 130
+L+
Sbjct: 234 KTLT 237
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 249
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 250 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 309
Query: 141 LSLS 130
+L+
Sbjct: 310 KTLT 313
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 418 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 477
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 478 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 537
Query: 141 LSLS 130
+L+
Sbjct: 538 KTLT 541
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 494 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 553
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 554 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 613
Query: 141 LSLS 130
+L+
Sbjct: 614 KTLT 617
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 570 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 629
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 630 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 689
Query: 141 LSLS 130
+L+
Sbjct: 690 KTLT 693
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 646 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 705
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 706 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 765
Query: 141 LSLS 130
+L+
Sbjct: 766 KTLT 769
Score = 234 bits (572), Expect = 3e-62
Identities = 116/123 (94%), Positives = 117/123 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 325
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 326 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 385
Query: 141 LSL 133
+L
Sbjct: 386 KTL 388
Score = 234 bits (572), Expect = 3e-62
Identities = 114/116 (98%), Positives = 115/116 (99%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 722 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 781
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN 154
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 782 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGD 837
Score = 232 bits (567), Expect = 1e-61
Identities = 115/124 (92%), Positives = 117/124 (94%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL GKTITLEVE SD
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLIGKTITLEVEASD 401
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 402 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 461
Query: 141 LSLS 130
+L+
Sbjct: 462 KTLT 465
Score = 155 bits (375), Expect = 2e-38
Identities = 77/85 (90%), Positives = 79/85 (92%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 204 IQKESTLHLVLRLRGGN*AFYLSLS 130
IQKESTLHLVLRLRGG F +L+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 97
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 98 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 157
Query: 141 LSLS 130
+L+
Sbjct: 158 KTLT 161
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 114 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 173
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 174 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 233
Query: 141 LSLS 130
+L+
Sbjct: 234 KTLT 237
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 249
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 250 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 309
Query: 141 LSLS 130
+L+
Sbjct: 310 KTLT 313
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 325
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 326 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 385
Query: 141 LSLS 130
+L+
Sbjct: 386 KTLT 389
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 401
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 402 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 461
Query: 141 LSLS 130
+L+
Sbjct: 462 KTLT 465
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 418 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 477
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 478 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 537
Query: 141 LSLS 130
+L+
Sbjct: 538 KTLT 541
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 494 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 553
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 554 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 613
Query: 141 LSLS 130
+L+
Sbjct: 614 KTLT 617
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 570 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 629
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 630 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 689
Query: 141 LSLS 130
+L+
Sbjct: 690 KTLT 693
Score = 234 bits (573), Expect = 2e-62
Identities = 116/124 (93%), Positives = 118/124 (95%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 646 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 705
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN*AFY 142
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG F
Sbjct: 706 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFV 765
Query: 141 LSLS 130
+L+
Sbjct: 766 KTLT 769
Score = 233 bits (569), Expect = 7e-62
Identities = 113/116 (97%), Positives = 115/116 (99%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 322
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SD
Sbjct: 722 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 781
Query: 321 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN 154
TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK+STLHLVLRLRGG+
Sbjct: 782 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLVLRLRGGD 837
Score = 155 bits (375), Expect = 2e-38
Identities = 77/85 (90%), Positives = 79/85 (92%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 204 IQKESTLHLVLRLRGGN*AFYLSLS 130
IQKESTLHLVLRLRGG F +L+
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLT 85
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 154 bits (373), Expect = 4e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 204 IQKESTLHLVLRLRGG 157
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 84.2 bits (199), Expect = 5e-17
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 382
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 154 bits (373), Expect = 4e-38
Identities = 75/76 (98%), Positives = 75/76 (98%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 204 IQKESTLHLVLRLRGG 157
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 84.2 bits (199), Expect = 5e-17
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 382
PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 38 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 107 bits (258), Expect = 3e-24
Identities = 51/100 (51%), Positives = 71/100 (71%)
Frame = -1
Query: 462 EDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 283
+D RT+SDYNI+ STL L + ++ + + VKTL GKTI + ++ +DT+E +K K+Q+K
Sbjct: 135 KDQRTISDYNIKNGSTLRLEVPVKEKLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKH 194
Query: 282 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 163
G+PPDQQRLIF QLE+ R L YNI+ E +HLV R R
Sbjct: 195 GVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLVSRHR 234
Score = 45.2 bits (102), Expect = 3e-05
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 391
PDQQRLIF QLE+ R L YNI+ E +HLV R R
Sbjct: 198 PDQQRLIFGRAQLENDRALFAYNIRDEDIIHLVSRHR 234
Score = 33.9 bits (74), Expect = 0.067
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 277
M + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 59 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 103 bits (248), Expect = 5e-23
Identities = 47/76 (61%), Positives = 59/76 (77%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
M I VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 204 IQKESTLHLVLRLRGG 157
+ S LHLVL LRGG
Sbjct: 61 VLGGSVLHLVLALRGG 76
Score = 55.2 bits (127), Expect = 3e-08
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = -1
Query: 501 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 385
P QQRLIFAGKQ+ D +T +DY + S LHLVL LRGG
Sbjct: 38 PPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.5 bits (175), Expect = 4e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 274
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 64.1 bits (149), Expect = 5e-11
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = -1
Query: 378 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 199
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 198 KESTLHLVLRLRGG 157
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
Score = 35.5 bits (78), Expect = 0.022
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1
Query: 498 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 385
++QRL +AG+QLED SD I E+T+++ L L GG
Sbjct: 37 EEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 64.1 bits (149), Expect = 5e-11
Identities = 34/74 (45%), Positives = 51/74 (68%)
Frame = -1
Query: 378 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 199
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 198 KESTLHLVLRLRGG 157
E+T+++ L L GG
Sbjct: 57 SEATIYVNLELLGG 70
Score = 35.5 bits (78), Expect = 0.022
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -1
Query: 498 DQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 385
++QRL +AG+QLED SD I E+T+++ L L GG
Sbjct: 37 EEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 57.6 bits (133), Expect = 5e-09
Identities = 29/71 (40%), Positives = 43/71 (60%)
Frame = -1
Query: 381 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 202
QIFVK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNI
Sbjct: 155 QIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNI 213
Query: 201 QKESTLHLVLR 169
QK ST+ + R
Sbjct: 214 QKSSTITMYFR 224
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = -1
Query: 486 LIFAGKQLEDGRTLSDYNIQKESTLHLVLR 397
L F+GK+LED ++ DYNIQK ST+ + R
Sbjct: 195 LSFSGKRLEDHCSIGDYNIQKSSTITMYFR 224
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 48.0 bits (109), Expect = 4e-06
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = -1
Query: 387 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTL 217
G++I+V+ G+T TL+ SDT+ +VKAKI +K I P+ Q+L+ L+ D TL
Sbjct: 102 GIRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTL 160
Query: 216 SDYNIQKESTLHL 178
D + + STL L
Sbjct: 161 FDNSFENGSTLRL 173
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = -1
Query: 501 PDQQRLIFAGKQLE---DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEV 334
P+ Q+L+ L+ D TL D + + STL L + + + +FVKT TGKTIT+ +
Sbjct: 139 PNTQKLLLENWDLDLFSDHSTLFDNSFENGSTLRLEVSIEKEIDVFVKTYTGKTITISI 197
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 277
M + +KT TGK IT+E S VK +++DK+G+
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/72 (38%), Positives = 37/72 (51%)
Frame = -1
Query: 381 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 202
Q FV+ L GKT TL V SDT+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 201 QKESTLHLVLRL 166
ST+ L R+
Sbjct: 99 SNNSTMDLHFRI 110
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/46 (43%), Positives = 33/46 (71%)
Frame = -1
Query: 378 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK 241
+FVKTL +T+ LEV ++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 42.7 bits (96), Expect = 1e-04
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = -1
Query: 360 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 181
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 180 L 178
L
Sbjct: 241 L 241
Score = 31.5 bits (68), Expect = 0.36
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -1
Query: 489 RLIFAGKQLEDGRTLSDYNIQKESTLHL 406
R++ K LED TL+ YNIQ+ STL L
Sbjct: 214 RMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 41.1 bits (92), Expect = 4e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = -1
Query: 363 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 184
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 183 HLVLRLRGG 157
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 41.1 bits (92), Expect = 4e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = -1
Query: 363 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 184
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 183 HLVLRLRGG 157
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = -1
Query: 342 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 163
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 489 RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 391
R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 237 RMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = -1
Query: 342 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 184
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 211
+ + +TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+D + +
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGE 111
Query: 210 YNIQKESTLHLVLRLR 163
+ ++L R
Sbjct: 112 VGFDSSKFVVVMLSKR 127
>U53148-5|AAB37076.1| 130|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 30 protein.
Length = 130
Score = 35.5 bits (78), Expect = 0.022
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
MQIF+ L T TL+V+ S T+ +K I E + + + K L + TL +
Sbjct: 1 MQIFLLGLDNTTHTLDVDASTTLSAIKGVIGAGE-----EFSISYGSKVLSEELTLGECQ 55
Query: 204 IQKESTLHLVLRLRGG 157
I+ STL + RL GG
Sbjct: 56 IESLSTLSVNGRLLGG 71
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = -1
Query: 366 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 187
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 186 LHLVLR 169
+ L++R
Sbjct: 207 VELLVR 212
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 33.5 bits (73), Expect = 0.088
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = -1
Query: 369 KTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 190
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 189 TLHLV 175
+ L+
Sbjct: 73 QIMLL 77
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 32.7 bits (71), Expect = 0.15
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 204 IQKESTLHLVLR 169
I T+HLV R
Sbjct: 81 ISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 32.7 bits (71), Expect = 0.15
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 204 IQKESTLHLVLR 169
I T+HLV R
Sbjct: 81 ISDGQTVHLVDR 92
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 32.3 bits (70), Expect = 0.20
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = -1
Query: 363 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 184
L G I +E++ DTI V + G+ +QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 1.4
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDY 208
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 207 NIQK 196
IQ+
Sbjct: 56 KIQE 59
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 372 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 274
+ TL G+TI V P + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 390 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 247
G M +TLTG I + EP + KA +Q E P + QR++ A
Sbjct: 537 GVMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -1
Query: 390 GGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 247
G M +TLTG I + EP + KA +Q E P + QR++ A
Sbjct: 537 GVMASVYQTLTGSLIPPKSEPIGRPASPKAILQKAETDPKELQRIVLA 584
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.3 bits (60), Expect = 3.3
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -1
Query: 342 LEVEPSDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 178
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYL 155
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -1
Query: 486 LIFAGKQLEDGRTLSDYNIQKESTLHL 406
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/52 (21%), Positives = 28/52 (53%)
Frame = -1
Query: 384 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 229
+Q+ + + TGK++ + VE + +E D+EG+ L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = -1
Query: 486 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENV 307
L F G G LSD + + R +G ++ K++ G + LE E ++ ++ +
Sbjct: 409 LPFVGFSYTHGSLLSDARSLTDEIRAIAQRCQGDAELMEKSVDGFMVELENEKAELVQKL 468
Query: 306 K 304
K
Sbjct: 469 K 469
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 415 SSLGAPSQRWNANIREDPHWQDHHARGGAIRHYRKCESKDSGQRRHSS*SAAT 257
SS + S ++ ++ H HA+ +H++K ES S SS S+++
Sbjct: 122 SSSSSSSSSSSSESEDEKHHHKKHAKKHLKKHHKKAESSSSSSSSSSSSSSSS 174
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 415 SSLGAPSQRWNANIREDPHWQDHHARGGAIRHYRKCESKDSGQRRHSS*SAAT 257
SS + S ++ ++ H HA+ +H++K ES S SS S+++
Sbjct: 169 SSSSSSSSSSSSESEDEKHHHKKHAKKHLKKHHKKAESSSSSSSSSSSSSSSS 221
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = -3
Query: 415 SSLGAPSQRWNANIREDPHWQDHHARGGAIRHYRKCESKDSGQRRHSS*SAAT 257
SS + S +++ E + HH + +H++K ES S SS S+++
Sbjct: 214 SSSSSSSSSSSSSSSESEDEKHHHKKHAVKKHHKKAESSSSSSSSSSSSSSSS 266
>Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical
protein ZC504.3 protein.
Length = 668
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -3
Query: 394 QRWNANIREDPHWQDHHARGGAIRHYRKCESKDSGQRRHSS*SAATDFC 248
+R+ +E H + HH R YRK +S+D R S + + +C
Sbjct: 39 ERYRDKEKERDH-ERHHDRERRDDRYRKVDSRDHRDRNRRSPAGSRTYC 86
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 354 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 256
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,086,271
Number of Sequences: 27780
Number of extensions: 230431
Number of successful extensions: 701
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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