Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_B02
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione S-tran...    24   4.2  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   5.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   5.5  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.6  

>AF513635-1|AAM53607.1|  212|Anopheles gambiae glutathione
           S-transferase D4 protein.
          Length = 212

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 20/67 (29%), Positives = 27/67 (40%)
 Frame = -2

Query: 353 LTPIFVLFLMVDTCIPY*RPNDNCLITS*LDYNYRNNEAIYIKKILNRISKPYRIYSGFK 174
           L P  +L ++VD       P   C I   L   Y  N+A+Y K  L R     R++    
Sbjct: 45  LNPHHILPMLVDNGTVVFEP---CAIVLYLVEMYAKNDALYPKDALVRCVVNQRLFFDVS 101

Query: 173 YTFCYIY 153
             F  IY
Sbjct: 102 TLFKQIY 108


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -3

Query: 211 VSVNRTVSILVLNIHF 164
           VS++  V+++VLN+HF
Sbjct: 317 VSISICVTVVVLNVHF 332


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -3

Query: 211 VSVNRTVSILVLNIHF 164
           VS++  V+++VLN+HF
Sbjct: 317 VSISICVTVVVLNVHF 332


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 58  SPPEGDPEIMRATNSS 105
           SPPE +P ++ ATN++
Sbjct: 613 SPPEIEPAVLFATNNA 628


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,161
Number of Sequences: 2352
Number of extensions: 11559
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)