Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_B02
         (585 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X54132-1|CAA38067.1|  610|Homo sapiens protein-tyrosine phosphat...    30   6.9  
U46116-1|AAC50439.1| 1445|Homo sapiens receptor tyrosine phospha...    30   6.9  
L09247-1|AAA60224.1| 1445|Homo sapiens receptor-type protein tyr...    30   6.9  
AB209871-1|BAD93108.1| 1530|Homo sapiens protein tyrosine phosph...    30   6.9  

>X54132-1|CAA38067.1|  610|Homo sapiens protein-tyrosine phosphatase
           protein.
          Length = 610

 Score = 29.9 bits (64), Expect = 6.9
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = +3

Query: 255 VIIQLTGYKTVVVWTL----IRDTRVNH-QK*NKNWRQIQDHIITYHFTKW 392
           +I+ L   K    +T+    IR+T+V   QK N   RQ +  +I YH+T+W
Sbjct: 141 IIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQW 191


>U46116-1|AAC50439.1| 1445|Homo sapiens receptor tyrosine phosphatase
            gamma protein.
          Length = 1445

 Score = 29.9 bits (64), Expect = 6.9
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = +3

Query: 255  VIIQLTGYKTVVVWTL----IRDTRVNH-QK*NKNWRQIQDHIITYHFTKW 392
            +I+ L   K    +T+    IR+T+V   QK N   RQ +  +I YH+T+W
Sbjct: 976  IIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQW 1026


>L09247-1|AAA60224.1| 1445|Homo sapiens receptor-type protein tyrosine
            phosphatase gamma protein.
          Length = 1445

 Score = 29.9 bits (64), Expect = 6.9
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = +3

Query: 255  VIIQLTGYKTVVVWTL----IRDTRVNH-QK*NKNWRQIQDHIITYHFTKW 392
            +I+ L   K    +T+    IR+T+V   QK N   RQ +  +I YH+T+W
Sbjct: 976  IIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQW 1026


>AB209871-1|BAD93108.1| 1530|Homo sapiens protein tyrosine
            phosphatase, receptor type, G precursor variant protein.
          Length = 1530

 Score = 29.9 bits (64), Expect = 6.9
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = +3

Query: 255  VIIQLTGYKTVVVWTL----IRDTRVNH-QK*NKNWRQIQDHIITYHFTKW 392
            +I+ L   K    +T+    IR+T+V   QK N   RQ +  +I YH+T+W
Sbjct: 1061 IIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQW 1111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,264,470
Number of Sequences: 237096
Number of extensions: 1528997
Number of successful extensions: 7079
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7079
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)