Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_A24
         (513 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   1.9  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   3.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   3.2  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   5.7  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   5.7  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.5  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 240  LRVAPEEHPVLLTEAPLNPKANREKM 317
            LR+ P  H V+ T   +NP  + EK+
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL 1486



 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +2

Query: 146  GYPHTQIPHRTRHRHQLGRYGEDLASHLLQ*AACSS 253
            GY H    H T HR Q+    + +   +    +C+S
Sbjct: 1678 GYHHNVNKHCTIHRTQVKETDDKICFTMRPVVSCAS 1713


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 242 QLIVEGVMPDLLHIV 198
           Q +V+ V PD+LH++
Sbjct: 23  QTVVDKVPPDMLHLI 37


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = +2

Query: 344 HTRHVRSXPGRALTVRVRSYHRVSCWIPAMVFPTQYPSTRVTPYRTPS 487
           H  H+ S  GR+       Y   + ++P    P Q+  ++  P+R  S
Sbjct: 286 HHSHLSSALGRSACHSPGVYPSTAGFLPPSYHPHQHHPSQYHPHRGSS 333


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 71  TSSPGRHGRHGSEGL 115
           T+  G HG HG  GL
Sbjct: 129 TNQTGLHGLHGLHGL 143


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 3   GMCKAGFAGD 32
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
 Frame = +2

Query: 410 VSCWIPAMVFPTQYPSTRVTP--YRTPSCVW 496
           V+CW+P  +     P   V P     P+  W
Sbjct: 316 VACWLPFFILYLATPFVPVEPPDILMPALTW 346


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 437 FPTQYPSTRVTPY 475
           F  +YP+  VTPY
Sbjct: 434 FQCRYPNASVTPY 446


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,529
Number of Sequences: 438
Number of extensions: 3593
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)