Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_A19
(265 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 63 5e-12
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 58 2e-10
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 51 3e-08
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 42 1e-05
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 41 2e-05
SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase ... 27 0.32
SPAC12G12.16c ||SPAC18B11.01c|nuclease, XP-G family|Schizosaccha... 25 1.7
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 25 1.7
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 25 2.3
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 25 2.3
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 24 4.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 23 5.3
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha... 23 5.3
SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces ... 23 7.0
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 23 7.0
SPCC1753.04 |tol1||3'|Schizosaccharomyces pombe|chr 3|||Manual 23 9.2
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 23 9.2
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 63.3 bits (147), Expect = 5e-12
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = +1
Query: 40 FHRYSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVR 219
F + WR ++QRG L +LA +E++ +YLA +ETLDNGK + A +V A+ R
Sbjct: 73 FQTDAPWRKFSSAQRGRCLSRLADCIEQNLEYLASIETLDNGKSITLARGDVQAAADCFR 132
Query: 220 YYAGKAEQILGNTI 261
YY G A++ G TI
Sbjct: 133 YYGGWADKDYGQTI 146
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 58.4 bits (135), Expect = 2e-10
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +1
Query: 49 YSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKP-VKQAEQEVLWASGIVRYY 225
+ W+ + S++G LL KLA L E+ A LA +E +D+GKP V A +V ++RY
Sbjct: 69 FKTWKKVPGSEKGELLMKLAELTEKHADTLAAIEAMDSGKPLVSNARGDVDGTIALLRYC 128
Query: 226 AGKAEQILGNTIP 264
AG A++I G IP
Sbjct: 129 AGWADKIYGQVIP 141
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 50.8 bits (116), Expect = 3e-08
Identities = 25/62 (40%), Positives = 38/62 (61%)
Frame = +1
Query: 79 QRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKAEQILGNT 258
QR LL + A L+ + L ++ TL+NGKP+ QAE EV SG +++YA +A + G+
Sbjct: 78 QRSQLLERWAELIMENKDDLVKMLTLENGKPLSQAEMEVTTCSGYLKWYAAEAVRTFGDV 137
Query: 259 IP 264
P
Sbjct: 138 AP 139
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 42.3 bits (95), Expect = 1e-05
Identities = 22/70 (31%), Positives = 43/70 (61%)
Frame = +1
Query: 49 YSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYA 228
+ +R D +R +L + L+ +A LA + TL+NGK + A+ EV++A+ + ++A
Sbjct: 74 FLSYRNSDIKERYAILRRWYDLIMENADDLATMMTLENGKALGDAKGEVVYAAKFIDWFA 133
Query: 229 GKAEQILGNT 258
G+A +I G++
Sbjct: 134 GEALRISGDS 143
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 41.1 bits (92), Expect = 2e-05
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 58 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKA 237
W QRGL+L K+A +M + LA ++T++ GKP A ++ + + YYA A
Sbjct: 78 WAKWPGKQRGLVLRKIAKMMREKRELLAGIDTINCGKPTPYALFDIDSCADMFEYYAEVA 137
Query: 238 E 240
E
Sbjct: 138 E 138
>SPBC1198.01 |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.5 bits (58), Expect = 0.32
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 172 VKQAEQEVLWASGIVRYYAGKAEQILG 252
VK+ + +W G + YAG+ QILG
Sbjct: 219 VKKGDTVAIWGMGPIGLYAGRWAQILG 245
>SPAC12G12.16c ||SPAC18B11.01c|nuclease, XP-G
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 496
Score = 25.0 bits (52), Expect = 1.7
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 76 SQRGLLLFKLATLMERDAKYLAE--LETLDNGKPVK 177
SQ G LLF L +L ERD + A+ E L+N V+
Sbjct: 143 SQIGKLLFDLRSLNERDNPFHAQNNAENLENATFVR 178
>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 467
Score = 25.0 bits (52), Expect = 1.7
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 183 CLLHWFSVVQCFEF 142
CL+HWF +++ EF
Sbjct: 337 CLVHWFQIMRSAEF 350
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 24.6 bits (51), Expect = 2.3
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 149 KHWTTENQ*SKQNKKSCGHQESLDITPEKLNKS*ETLS 262
KH E + SK K+S H E + + N S ET S
Sbjct: 108 KHAKGEGKRSKNRKRSSKHSEKQAVDLKSSNSSQETSS 145
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 24.6 bits (51), Expect = 2.3
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 136 LAELETLDNGKPVKQAEQEVLWASGIVRYYAGKAEQILGN 255
LA LET +N K V ++ + S V A + E+ GN
Sbjct: 410 LARLETYENAKKVLNKARQTIRTSHEVWIAAARLEEQQGN 449
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 23.8 bits (49), Expect = 4.0
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -1
Query: 94 AVGLFVKHPGDAI 56
A+G+ ++HPG AI
Sbjct: 138 AIGILIRHPGSAI 150
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 23.4 bits (48), Expect = 5.3
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = +1
Query: 58 WRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPV 174
WRL D ++ G LLF L A YL L GKP+
Sbjct: 322 WRLSDTTRSGRLLFPQFVL----AMYLCNLGL--TGKPI 354
>SPBC660.15 |||mRNA cleavage factor complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 23.4 bits (48), Expect = 5.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 179 KQNKKSCGHQESLDITPEKLNKS*ETL 259
K+ + + G+QE+ ++TP K N+ E L
Sbjct: 22 KKVESASGNQETSNVTPTKENEGYEEL 48
>SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 695
Score = 23.0 bits (47), Expect = 7.0
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +1
Query: 88 LLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGI 213
L+ KL + KY ++ D G P+ + + E L SG+
Sbjct: 531 LIKEKLTVNVPVKPKYSSQETAFDTGAPISEEQIEELLNSGL 572
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 23.0 bits (47), Expect = 7.0
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +3
Query: 60 ASPGCFTKRPTALQTGHPHGERRKIFSRTRNTGQRKTSEASRTRS 194
++P +TK+P+ + + ER+ + + NT K + T+S
Sbjct: 77 STPMSYTKQPSEAKYPNSVWERKGVSDQEENTSSVKRQKTLPTQS 121
>SPCC1753.04 |tol1||3'|Schizosaccharomyces pombe|chr 3|||Manual
Length = 353
Score = 22.6 bits (46), Expect = 9.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 121 RDAKYLAELETLDNGKPVKQA 183
R A+Y L ++NGKPV A
Sbjct: 146 RGAQYAICLALIENGKPVVSA 166
>SPBC12C2.02c |ste20|ste16|sterility protein
Ste20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1309
Score = 22.6 bits (46), Expect = 9.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 117 GERRKIFSRTRNTGQRKTSEASRTRSLVGIRN 212
G R IFS+ NTGQ+ + T+ L + N
Sbjct: 888 GHTRIIFSKALNTGQQAV-RLTATKHLAALIN 918
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,055,729
Number of Sequences: 5004
Number of extensions: 17642
Number of successful extensions: 48
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 2,362,478
effective HSP length: 61
effective length of database: 2,057,234
effective search space used: 53488084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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