Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_A16
         (472 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    40   2e-05
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   0.71 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   8.8  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 39.5 bits (88), Expect = 2e-05
 Identities = 35/139 (25%), Positives = 61/139 (43%), Gaps = 8/139 (5%)
 Frame = +2

Query: 26  LIHPQVVITAAHIVMNYKDFPTTINVRAGEWDTKIQME-PLRHQEMFLQKIYIHPGFNSR 202
           +I  + V+TAAH +++       I V   +W +K +    + H    + K+ IHP ++  
Sbjct: 192 IISKRYVLTAAHCIIDENTTKLAIVVGEHDWSSKTETNATVLHS---INKVIIHPKYDII 248

Query: 203 K----LTNDIAFLHLALPLELDAHINTICLPDAGEVFDDS---KNCVAXGWGKNRFGKDD 361
           +      NDIA L     ++    +   CLP   + F DS    +    GWG   F  + 
Sbjct: 249 EKDDWQINDIALLKTEKDIKFGDKVGPACLP--FQHFLDSFAGSDVTVLGWGHTSF--NG 304

Query: 362 EFAVVLKKIELDMVEHSRC 418
             + +L+K  L+M+    C
Sbjct: 305 MLSHILQKTTLNMLTQVEC 323


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 2   FSYIGVGVLIHPQVVITAAHIVMNYKDFPTTINVRAGEWD 121
           F Y+   + I PQ  +T + +  NY +   ++N   GE +
Sbjct: 463 FPYVHDTLQIQPQEQLTLSKVTSNYHEEFQSLNNAVGEME 502



 Score = 21.0 bits (42), Expect = 6.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 235 QMEESDVICKLSRIETRVNVNLL*KHLLMTERLHLDLCI 119
           +ME ++V   LS   T+ N++L    L  TE   LD+ +
Sbjct: 500 EMEATNVTNILSMDNTQYNLDLSLPQLDSTELADLDISL 538


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 453 LAPSSVYLSRSLQ 415
           LAPS  +L RSLQ
Sbjct: 276 LAPSDYFLFRSLQ 288


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,460
Number of Sequences: 438
Number of extensions: 2344
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)