Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_A15
         (86 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   1.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    19   5.4  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    19   7.2  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 1.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 61  HTKNGRRKHIFINN 20
           HTKNGR K+   +N
Sbjct: 437 HTKNGRLKYQISDN 450


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +1

Query: 16  CNYL*KCVYVFHFSYVFC 69
           CN+   C++ F  + V+C
Sbjct: 143 CNFKAYCLFSFLNTIVYC 160


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
          finger domain-Z1 isoform protein.
          Length = 111

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = -2

Query: 70 HRKHTKNGRRK 38
          HR+H+KN +++
Sbjct: 56 HRQHSKNEQQR 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,818
Number of Sequences: 438
Number of extensions: 142
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 10
effective length of database: 141,963
effective search space used:  2555334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)