Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_A12
         (468 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   2.9  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   6.6  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   8.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.7  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   8.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.7  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   8.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.7  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -2

Query: 275 HAVSHRIVSHRMHSYTDV 222
           +A  H+  ++RMH Y  V
Sbjct: 606 YAAPHKAFTYRMHGYASV 623


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 335 NYFMFSLEVY*SFPLYLAYPN 397
           NY++FSL +     L L  PN
Sbjct: 76  NYYLFSLAISDLILLVLGLPN 96


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 215 YAIHLYTSAYDAIRCDAI 268
           YA  LY+  YD +  D I
Sbjct: 18  YAEELYSDKYDYVNIDEI 35


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 367  LIYF*TKHKIIIKNSWNVFSSD 302
            +IYF  +HK   +  WN  S++
Sbjct: 1491 MIYFVVEHKKKNQQEWNQVSNN 1512


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 103 HAYTHKHIHTHAHA 62
           H +T  H H+H HA
Sbjct: 415 HHHTMGHGHSHIHA 428


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 397 LTSPQTHTHTPPDSPKPNPTELPI 468
           LT P ++  +P  SP P    +P+
Sbjct: 435 LTPPSSNPVSPVPSPDPLDLAIPV 458


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 215 YAIHLYTSAYDAIRCDAI 268
           YA  LY+  YD +  D I
Sbjct: 18  YAEELYSDKYDYVNIDEI 35


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 124 HQHSMYTHAYTHKHIHTHAHAYTNNV 47
           HQH  +T   T    H H H  T ++
Sbjct: 336 HQHGNHTMGPTMGPPHHHHHHQTQSL 361


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,557
Number of Sequences: 438
Number of extensions: 2448
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)