Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0008_A05
(527 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D87435-1|BAA13379.2| 1880|Homo sapiens KIAA0248 protein. 35 0.15
BC117682-1|AAI17683.1| 1855|Homo sapiens GBF1 protein protein. 35 0.15
BC117681-1|AAI17682.1| 1855|Homo sapiens GBF1 protein protein. 35 0.15
AL356420-1|CAH72761.1| 1859|Homo sapiens golgi-specific brefeldi... 35 0.15
AL160011-3|CAH71625.1| 1859|Homo sapiens golgi-specific brefeldi... 35 0.15
AL121928-2|CAI12515.1| 1859|Homo sapiens golgi-specific brefeldi... 35 0.15
AF068755-1|AAD15903.1| 1859|Homo sapiens sec7 domain family memb... 35 0.15
BT009771-1|AAP88773.1| 614|Homo sapiens histone deacetylase 7A ... 30 4.4
BC064840-1|AAH64840.1| 954|Homo sapiens HDAC7A protein protein. 30 4.4
BC020505-1|AAH20505.2| 711|Homo sapiens HDAC7A protein protein. 30 4.4
AY321367-1|AAP84704.1| 915|Homo sapiens histone deacetylase 7A ... 30 4.4
AY302468-1|AAQ18232.1| 991|Homo sapiens histone deacetylase pro... 30 4.4
AL117455-1|CAB55935.1| 878|Homo sapiens hypothetical protein pr... 30 4.4
AK024469-1|BAB15759.1| 484|Homo sapiens FLJ00062 protein protein. 30 4.4
AF239243-1|AAF63491.1| 855|Homo sapiens histone deacetylase 7 p... 30 4.4
>D87435-1|BAA13379.2| 1880|Homo sapiens KIAA0248 protein.
Length = 1880
Score = 35.1 bits (77), Expect = 0.15
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 72 VEMDRFVTPLNSGENTITRQSTESSLTIPFEQTFRDLSVQGKDAKRAEIEAFNYCGCGWP 251
+ + R TP N GE+T+ + +L+ P + + R S + ++AKR +E C P
Sbjct: 1081 ISLQREETPSNRGESTVLSFVSWLTLSGPEQSSVRGPSTENQEAKRVALECIKQCD---P 1137
Query: 252 QHMLV-PKGTEAGVVYQLFVMLSNYDFDKVDQPDGKELSCVEASMFCGLKNK 404
+ M+ K + + +L L + D+ + C+E + L+N+
Sbjct: 1138 EKMITESKFLQLESLQELMKALVSVTPDEETYDEEDAAFCLEMLLRIVLENR 1189
>BC117682-1|AAI17683.1| 1855|Homo sapiens GBF1 protein protein.
Length = 1855
Score = 35.1 bits (77), Expect = 0.15
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 72 VEMDRFVTPLNSGENTITRQSTESSLTIPFEQTFRDLSVQGKDAKRAEIEAFNYCGCGWP 251
+ + R TP N GE+T+ + +L+ P + + R S + ++AKR +E C P
Sbjct: 1060 ISLQREETPSNRGESTVLSFVSWLTLSGPEQSSVRGPSTENQEAKRVALECIKQCD---P 1116
Query: 252 QHMLV-PKGTEAGVVYQLFVMLSNYDFDKVDQPDGKELSCVEASMFCGLKNK 404
+ M+ K + + +L L + D+ + C+E + L+N+
Sbjct: 1117 EKMITESKFLQLESLQELMKALVSVTPDEETYDEEDAAFCLEMLLRIVLENR 1168
>BC117681-1|AAI17682.1| 1855|Homo sapiens GBF1 protein protein.
Length = 1855
Score = 35.1 bits (77), Expect = 0.15
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 72 VEMDRFVTPLNSGENTITRQSTESSLTIPFEQTFRDLSVQGKDAKRAEIEAFNYCGCGWP 251
+ + R TP N GE+T+ + +L+ P + + R S + ++AKR +E C P
Sbjct: 1060 ISLQREETPSNRGESTVLSFVSWLTLSGPEQSSVRGPSTENQEAKRVALECIKQCD---P 1116
Query: 252 QHMLV-PKGTEAGVVYQLFVMLSNYDFDKVDQPDGKELSCVEASMFCGLKNK 404
+ M+ K + + +L L + D+ + C+E + L+N+
Sbjct: 1117 EKMITESKFLQLESLQELMKALVSVTPDEETYDEEDAAFCLEMLLRIVLENR 1168
>AL356420-1|CAH72761.1| 1859|Homo sapiens golgi-specific brefeldin A
resistance factor 1 protein.
Length = 1859
Score = 35.1 bits (77), Expect = 0.15
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 72 VEMDRFVTPLNSGENTITRQSTESSLTIPFEQTFRDLSVQGKDAKRAEIEAFNYCGCGWP 251
+ + R TP N GE+T+ + +L+ P + + R S + ++AKR +E C P
Sbjct: 1060 ISLQREETPSNRGESTVLSFVSWLTLSGPEQSSVRGPSTENQEAKRVALECIKQCD---P 1116
Query: 252 QHMLV-PKGTEAGVVYQLFVMLSNYDFDKVDQPDGKELSCVEASMFCGLKNK 404
+ M+ K + + +L L + D+ + C+E + L+N+
Sbjct: 1117 EKMITESKFLQLESLQELMKALVSVTPDEETYDEEDAAFCLEMLLRIVLENR 1168
>AL160011-3|CAH71625.1| 1859|Homo sapiens golgi-specific brefeldin A
resistance factor 1 protein.
Length = 1859
Score = 35.1 bits (77), Expect = 0.15
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 72 VEMDRFVTPLNSGENTITRQSTESSLTIPFEQTFRDLSVQGKDAKRAEIEAFNYCGCGWP 251
+ + R TP N GE+T+ + +L+ P + + R S + ++AKR +E C P
Sbjct: 1060 ISLQREETPSNRGESTVLSFVSWLTLSGPEQSSVRGPSTENQEAKRVALECIKQCD---P 1116
Query: 252 QHMLV-PKGTEAGVVYQLFVMLSNYDFDKVDQPDGKELSCVEASMFCGLKNK 404
+ M+ K + + +L L + D+ + C+E + L+N+
Sbjct: 1117 EKMITESKFLQLESLQELMKALVSVTPDEETYDEEDAAFCLEMLLRIVLENR 1168
>AL121928-2|CAI12515.1| 1859|Homo sapiens golgi-specific brefeldin A
resistance factor 1 protein.
Length = 1859
Score = 35.1 bits (77), Expect = 0.15
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 72 VEMDRFVTPLNSGENTITRQSTESSLTIPFEQTFRDLSVQGKDAKRAEIEAFNYCGCGWP 251
+ + R TP N GE+T+ + +L+ P + + R S + ++AKR +E C P
Sbjct: 1060 ISLQREETPSNRGESTVLSFVSWLTLSGPEQSSVRGPSTENQEAKRVALECIKQCD---P 1116
Query: 252 QHMLV-PKGTEAGVVYQLFVMLSNYDFDKVDQPDGKELSCVEASMFCGLKNK 404
+ M+ K + + +L L + D+ + C+E + L+N+
Sbjct: 1117 EKMITESKFLQLESLQELMKALVSVTPDEETYDEEDAAFCLEMLLRIVLENR 1168
>AF068755-1|AAD15903.1| 1859|Homo sapiens sec7 domain family member
protein.
Length = 1859
Score = 35.1 bits (77), Expect = 0.15
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +3
Query: 72 VEMDRFVTPLNSGENTITRQSTESSLTIPFEQTFRDLSVQGKDAKRAEIEAFNYCGCGWP 251
+ + R TP N GE+T+ + +L+ P + + R S + ++AKR +E C P
Sbjct: 1060 ISLQREETPSNRGESTVLSFVSWLTLSGPEQSSVRGPSTENQEAKRVALECIKQCD---P 1116
Query: 252 QHMLV-PKGTEAGVVYQLFVMLSNYDFDKVDQPDGKELSCVEASMFCGLKNK 404
+ M+ K + + +L L + D+ + C+E + L+N+
Sbjct: 1117 EKMITESKFLQLESLQELMKALVSVTPDEETYDEEDAAFCLEMLLRIVLENR 1168
>BT009771-1|AAP88773.1| 614|Homo sapiens histone deacetylase 7A
protein.
Length = 614
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 173 ERLFERYRQRGLCRLPCDCIFTRVQWCNE--SVHLNKHLPLFGERP 42
+ ++ R ++RGL R C+C+ R E SVH +H+ L+G P
Sbjct: 211 QSIWSRLQERGL-RSQCECLRGRKASLEELQSVHSERHVLLYGTNP 255
>BC064840-1|AAH64840.1| 954|Homo sapiens HDAC7A protein protein.
Length = 954
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 173 ERLFERYRQRGLCRLPCDCIFTRVQWCNE--SVHLNKHLPLFGERP 42
+ ++ R ++RGL R C+C+ R E SVH +H+ L+G P
Sbjct: 551 QSIWSRLQERGL-RSQCECLRGRKASLEELQSVHSERHVLLYGTNP 595
>BC020505-1|AAH20505.2| 711|Homo sapiens HDAC7A protein protein.
Length = 711
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 173 ERLFERYRQRGLCRLPCDCIFTRVQWCNE--SVHLNKHLPLFGERP 42
+ ++ R ++RGL R C+C+ R E SVH +H+ L+G P
Sbjct: 308 QSIWSRLQERGL-RSQCECLRGRKASLEELQSVHSERHVLLYGTNP 352
>AY321367-1|AAP84704.1| 915|Homo sapiens histone deacetylase 7A
variant 3 protein.
Length = 915
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 173 ERLFERYRQRGLCRLPCDCIFTRVQWCNE--SVHLNKHLPLFGERP 42
+ ++ R ++RGL R C+C+ R E SVH +H+ L+G P
Sbjct: 512 QSIWSRLQERGL-RSQCECLRGRKASLEELQSVHSERHVLLYGTNP 556
>AY302468-1|AAQ18232.1| 991|Homo sapiens histone deacetylase
protein.
Length = 991
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 173 ERLFERYRQRGLCRLPCDCIFTRVQWCNE--SVHLNKHLPLFGERP 42
+ ++ R ++RGL R C+C+ R E SVH +H+ L+G P
Sbjct: 588 QSIWSRLQERGL-RSQCECLRGRKASLEELQSVHSERHVLLYGTNP 632
>AL117455-1|CAB55935.1| 878|Homo sapiens hypothetical protein
protein.
Length = 878
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 173 ERLFERYRQRGLCRLPCDCIFTRVQWCNE--SVHLNKHLPLFGERP 42
+ ++ R ++RGL R C+C+ R E SVH +H+ L+G P
Sbjct: 475 QSIWSRLQERGL-RSQCECLRGRKASLEELQSVHSERHVLLYGTNP 519
>AK024469-1|BAB15759.1| 484|Homo sapiens FLJ00062 protein protein.
Length = 484
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 173 ERLFERYRQRGLCRLPCDCIFTRVQWCNE--SVHLNKHLPLFGERP 42
+ ++ R ++RGL R C+C+ R E SVH +H+ L+G P
Sbjct: 81 QSIWSRLQERGL-RSQCECLRGRKASLEELQSVHSERHVLLYGTNP 125
>AF239243-1|AAF63491.1| 855|Homo sapiens histone deacetylase 7
protein.
Length = 855
Score = 30.3 bits (65), Expect = 4.4
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 173 ERLFERYRQRGLCRLPCDCIFTRVQWCNE--SVHLNKHLPLFGERP 42
+ ++ R ++RGL R C+C+ R E SVH +H+ L+G P
Sbjct: 509 QSIWSRLQERGL-RSQCECLRGRKASLEELQSVHSERHVLLYGTNP 553
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,103,447
Number of Sequences: 237096
Number of extensions: 1568027
Number of successful extensions: 7301
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7301
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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