Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0008_A03
         (58 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   4.2  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        18   9.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    18   9.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    18   9.7  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 54  EEKHESFHCRIVSELSGE 1
           E+ ++++ CR    L+GE
Sbjct: 173 EDGYKTYQCRTKHRLTGE 190


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = +2

Query: 2  SPDNSDTIRQ 31
          +PDN+ T+R+
Sbjct: 33 TPDNNKTVRE 42


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = -2

Query: 57  EEEKHESFHCR 25
           E  KH + HC+
Sbjct: 722 ERNKHVALHCQ 732


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/11 (45%), Positives = 7/11 (63%)
 Frame = -2

Query: 57  EEEKHESFHCR 25
           E  KH + HC+
Sbjct: 718 ERNKHVALHCQ 728


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,673
Number of Sequences: 438
Number of extensions: 37
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 0
effective length of database: 146,343
effective search space used:  2634174
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)