Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_P19
         (576 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC026023-1|AAH26023.1|  225|Homo sapiens FAM57A protein protein.       31   3.8  
AK025935-1|BAB15286.1|  257|Homo sapiens ocation}.  protein.           31   3.8  
X97674-1|CAA66263.1| 1464|Homo sapiens transcriptional intermedi...    29   8.9  
BC114383-1|AAI14384.1| 1464|Homo sapiens nuclear receptor coacti...    29   8.9  
AL022162-3|CAI95697.1|  122|Homo sapiens apelin, AGTRL1 ligand p...    29   8.9  
AK001855-1|BAA91944.1|  122|Homo sapiens protein ( Homo sapiens ...    29   8.9  

>BC026023-1|AAH26023.1|  225|Homo sapiens FAM57A protein protein.
          Length = 225

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -2

Query: 521 LLREC*RVVRG*KRWIKKNYYDEL*KRPIVSSNKFKLVELTRRRDESRAPLL 366
           ++R C  V+ G + W+ + Y   L    I  S    L E  R RD++RAP L
Sbjct: 58  IIRSCDDVITG-RHWLAREYVWFLIPYMIYDSYAMYLCEWCRTRDQNRAPSL 108


>AK025935-1|BAB15286.1|  257|Homo sapiens ocation}.  protein.
          Length = 257

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -2

Query: 521 LLREC*RVVRG*KRWIKKNYYDEL*KRPIVSSNKFKLVELTRRRDESRAPLL 366
           ++R C  V+ G + W+ + Y   L    I  S    L E  R RD++RAP L
Sbjct: 58  IIRSCDDVITG-RHWLAREYVWFLIPYMIYDSYAMYLCEWCRTRDQNRAPSL 108


>X97674-1|CAA66263.1| 1464|Homo sapiens transcriptional intermediary
           factor 2 protein.
          Length = 1464

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +1

Query: 94  HQVVCPPCGGSTQVTSSGACHPFENPLSLFTLPRGRGGGCG 216
           HQ +C    G     SS    P   P     +P GR GG G
Sbjct: 405 HQALCSGNPGQDMTLSSNINFPINGPKEQMGMPMGRFGGSG 445


>BC114383-1|AAI14384.1| 1464|Homo sapiens nuclear receptor
           coactivator 2 protein.
          Length = 1464

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = +1

Query: 94  HQVVCPPCGGSTQVTSSGACHPFENPLSLFTLPRGRGGGCG 216
           HQ +C    G     SS    P   P     +P GR GG G
Sbjct: 405 HQALCSGNPGQDMTLSSNINFPINGPKEQMGMPMGRFGGSG 445


>AL022162-3|CAI95697.1|  122|Homo sapiens apelin, AGTRL1 ligand
           protein.
          Length = 122

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +1

Query: 70  HPADFCDIHQVVCPPCG-GSTQVTSSGAC-HPFENPLSLFTLPRGRGGGCGHEISNSI 237
           HP   C +H++VC   G  S Q++    C H +    S    P+ R  GC  + S S+
Sbjct: 51  HPRRLCLLHRLVCFSGGLTSIQLSPRTCCSHQWAQLFSPACFPQWRAPGCSLDDSRSL 108


>AK001855-1|BAA91944.1|  122|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10993 fis, clone PLACE1002140. ).
          Length = 122

 Score = 29.5 bits (63), Expect = 8.9
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +1

Query: 70  HPADFCDIHQVVCPPCG-GSTQVTSSGAC-HPFENPLSLFTLPRGRGGGCGHEISNSI 237
           HP   C +H++VC   G  S Q++    C H +    S    P+ R  GC  + S S+
Sbjct: 51  HPLRLCLLHRLVCFSGGLTSIQLSPRTCCSHQWAQLFSPACFPQWRAPGCSLDDSRSL 108


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,794,546
Number of Sequences: 237096
Number of extensions: 2025661
Number of successful extensions: 4415
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4402
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)