Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_P13
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0158 + 1307648-1309462 36 0.028
12_01_0156 + 1188143-1189957 33 0.26
01_06_0445 - 29441472-29442152,29442244-29442357,29442959-294431... 33 0.26
04_02_0034 - 8999618-9000358,9001439-9001618,9001666-9003621,900... 32 0.45
11_04_0289 - 15804766-15804977,15805742-15805862,15806541-158067... 31 1.0
12_02_0117 - 13860418-13860524,13860612-13860810,13860969-138611... 30 1.8
07_03_0324 + 16803652-16803990,16804001-16804054,16804264-168042... 30 1.8
10_08_0901 - 21443224-21444085,21444804-21444998,21445189-214452... 29 2.4
06_01_0298 - 2170160-2170281,2170401-2170479,2170653-2170714,217... 29 3.2
05_01_0166 + 1145829-1145971,1146211-1146235,1147330-1147425,114... 29 3.2
02_04_0607 - 24302582-24303075,24303150-24304197 24 3.8
10_06_0018 - 9674771-9674995,9675079-9675126,9675471-9675530,967... 29 4.2
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 29 4.2
05_01_0157 + 1056024-1056116,1056417-1056631,1057027-1057297,105... 28 5.6
03_02_0493 - 8866685-8866888,8866989-8867059,8867143-8867416,886... 28 5.6
01_01_0908 + 7158172-7158356,7159436-7159866,7159953-7161061,716... 28 5.6
06_02_0086 - 11567390-11567634,11568316-11568341,11571082-115712... 28 7.4
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 28 7.4
11_02_0055 - 7819391-7820098,7820202-7820534,7820930-7821103 27 9.7
04_03_0329 - 14454840-14454862,14483886-14485630,14485843-14486648 27 9.7
02_04_0240 - 21194597-21194743,21195579-21195680,21195797-211958... 27 9.7
>11_01_0158 + 1307648-1309462
Length = 604
Score = 35.9 bits (79), Expect = 0.028
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = -3
Query: 463 SKRVVLSVLLAFSASHMFLLMFHSWGA---ISMDVPEVSLAFIVK*TMRPTHVINATRAA 293
S S+L +FSASH L+ +WGA + +P + AF+V + RP H+ N +A
Sbjct: 65 SAAAAASLLASFSASHPLCLLLINWGAHRDLRAVLPPAATAFVVD-SHRPIHLHNL--SA 121
Query: 292 AHDNLSAL 269
A+D + L
Sbjct: 122 ANDRVVVL 129
>12_01_0156 + 1188143-1189957
Length = 604
Score = 32.7 bits (71), Expect = 0.26
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = -3
Query: 463 SKRVVLSVLLAFSASHMFLLMFHSWGA---ISMDVPEVSLAFIVK*TMRPTHVINATRAA 293
S S+L +FSAS L+ +WGA + +P + AF+V + RP H+ N +A
Sbjct: 65 SAAAAASLLASFSASQPLCLLLINWGAHRDLRAVLPPAATAFVVD-SHRPIHLHNL--SA 121
Query: 292 AHDNLSAL 269
A+D + L
Sbjct: 122 ANDRVVVL 129
>01_06_0445 -
29441472-29442152,29442244-29442357,29442959-29443186,
29443284-29443586
Length = 441
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 167 DVKAGSLGHVEVGYCGYCGTEGGSD--RSLVHHHHFGAGARPAAQ 39
D + G + HV+ G+C ++G +D RS +H H GA R A+
Sbjct: 164 DERGGRVDHVKEAEAGWCDSQGTADDVRSKIHMRHEGAIKRERAR 208
>04_02_0034 -
8999618-9000358,9001439-9001618,9001666-9003621,
9004647-9004786,9004871-9005282,9006399-9006638
Length = 1222
Score = 31.9 bits (69), Expect = 0.45
Identities = 11/21 (52%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = +1
Query: 229 PYHVICGKWRRIQ-AELKDYR 288
PYH++ G+WR++Q AEL+++R
Sbjct: 212 PYHIVYGEWRKMQLAELEEWR 232
>11_04_0289 -
15804766-15804977,15805742-15805862,15806541-15806776,
15807639-15807766,15807873-15807910,15808041-15808129,
15808669-15808774,15811395-15811580
Length = 371
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 74 DDERESGRFRPLYRSTHSIQPQRDQDYRPSHRPKVRVRHSEC 199
DDE E+ PLYR ++ P D RP R + RH C
Sbjct: 205 DDELEA--LSPLYRRAWALYPLLTTDGRPQQRRRQPARHISC 244
>12_02_0117 -
13860418-13860524,13860612-13860810,13860969-13861148,
13861230-13861375,13862185-13862323,13863076-13863153,
13863654-13863722,13863806-13863925,13864792-13864875,
13864961-13865032,13865204-13865345,13866016-13866023
Length = 447
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 518 KSIALLTNGVLHDDQSQWVETRSSVCII 435
KS+ L T+G L DD+S WV T SS+ ++
Sbjct: 241 KSVGLRTDGRL-DDRSYWVSTVSSISVL 267
>07_03_0324 +
16803652-16803990,16804001-16804054,16804264-16804269,
16804657-16804731,16804864-16804983,16806571-16806762,
16806994-16807077,16807167-16807256,16807832-16807885,
16808006-16808085,16808523-16808633,16808707-16808761,
16808799-16808858
Length = 439
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 155 RPSHRPKVRVRHSECAQQRSGQRFAPTTLSVESGEE 262
RPS R+R + CA+ R +R AP L+V + EE
Sbjct: 26 RPSAGAAPRLRGASCARGRQPRRRAPPPLAVAAAEE 61
>10_08_0901 -
21443224-21444085,21444804-21444998,21445189-21445259,
21446293-21447094,21447687-21447723,21448270-21449023
Length = 906
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -2
Query: 170 ADVKAGSLGHVEVGYCGYCG--TEGGSDRSLVHHH 72
AD++ G H G C CG +GG + +L H H
Sbjct: 732 ADIRVGFYLHTADGKCDACGCVCKGGGEEALAHAH 766
>06_01_0298 -
2170160-2170281,2170401-2170479,2170653-2170714,
2170867-2170939
Length = 111
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/49 (26%), Positives = 31/49 (63%)
Frame = +3
Query: 24 EREHELSSRSSTGSEVVMMNERAVASALCTAVPTVSNLNVTKTTGLHIG 170
E++ ++ +SS + + + AV +A+CTA+PT +++ ++K ++G
Sbjct: 13 EQKFAMAKQSSHEAAIAGLKAAAV-TAVCTAIPTFASVRMSKWAKANLG 60
>05_01_0166 +
1145829-1145971,1146211-1146235,1147330-1147425,
1147544-1147645,1147767-1147889,1147996-1148622,
1148710-1148883,1148965-1149181,1149312-1149394,
1149478-1149573,1149676-1149724,1149850-1150088,
1150547-1150618,1150694-1150804,1150930-1151282,
1151377-1151464,1151691-1151789,1151860-1151991,
1152119-1152222,1153179-1153215,1153334-1153367,
1153451-1153467
Length = 1006
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = +3
Query: 3 MWSESDGEREHELSSRSSTGSEVVMMNERAVASALCTAVPTVSNLNVTKTTGLHIGPKFV 182
+W D E + RS + + + V + A PT LN TK L +
Sbjct: 612 IWDSDDDNINQEDNLRSEVTPRHGLKSSKIVPDSYSPACPT--ELNKTKIIPLDLSQNLY 669
Query: 183 SVTQNVHNNEVVKD 224
++QN NN +D
Sbjct: 670 DLSQNQENNSENED 683
>02_04_0607 - 24302582-24303075,24303150-24304197
Length = 513
Score = 23.8 bits (49), Expect(2) = 3.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -2
Query: 80 HHHHFGAGARPAAQLVFPFA 21
HHH GAGA A Q F +A
Sbjct: 92 HHHRGGAGAGGAQQGPFQWA 111
Score = 23.4 bits (48), Expect(2) = 3.8
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -2
Query: 149 LGHVEVGYCGYCGTEGGSDRSLVHHHH 69
LG + + Y G G + L HHHH
Sbjct: 59 LGKLNIRYNATSGRAGLRFQQLHHHHH 85
>10_06_0018 -
9674771-9674995,9675079-9675126,9675471-9675530,
9675693-9675758,9675844-9675906,9675985-9676032,
9676150-9676215,9676493-9676558,9676660-9676725,
9676822-9676887,9676975-9677058,9677310-9677654,
9677738-9677833,9678129-9678332,9678434-9678726,
9678833-9678958,9679217-9679226
Length = 643
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 333 VYFTIN-AKDTSGTSI--DIAPHEWNISRNMWLAEKANNTDRTTRFDPLRLVIVQHTVSQ 503
+YF +N K+ + ++ + +W N W+ EK+ + P R V+ HT +
Sbjct: 174 LYFDVNETKEANCNNVLEGVLSDQWIALVNHWMNEKSKRQKDPAKKKPHRAVVYVHTHKR 233
Query: 504 ECDRFI 521
+ D+ I
Sbjct: 234 KSDKNI 239
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +2
Query: 2 NVERK*RRTGTRAEQPVEHRLRSG---------DDERESGRFRPLYRSTHSIQPQRDQDY 154
N+ER + TG+ A++P++ ++S DD + + T Q Q +++
Sbjct: 286 NIERGAKNTGSTAKEPMQEMVKSNNDTGIIENVDDSQLQKNTSTNEKDTQKAQKQVEKEL 345
Query: 155 RPSHRPKVRVRHSECAQQRSGQR 223
+ + + R+R + QQ R
Sbjct: 346 KQKEKEEARMRKQQKKQQEEALR 368
>05_01_0157 +
1056024-1056116,1056417-1056631,1057027-1057297,
1058040-1058365,1058677-1058769,1060182-1060244,
1062788-1062928,1063438-1063620,1064215-1064413,
1064498-1064702,1065817-1065944
Length = 638
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 56 HRLRSGDDERESGRFRPLYRSTHSIQPQRDQDYRPSHR-PKVRV 184
H + +GDD S R P + + +P DQ+ R HR P+ V
Sbjct: 205 HSMDAGDDAEPSWRRSPSPPNPRARRPMLDQEIRRPHRFPRTEV 248
>03_02_0493 -
8866685-8866888,8866989-8867059,8867143-8867416,
8867666-8868036,8868127-8868482,8868558-8868630,
8869307-8869412,8869667-8869760,8870616-8870680,
8871655-8871927
Length = 628
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 620 HPSIVANHEVVRNIVAKRSKEVSL 549
HP+++A HE +RNI+ + E SL
Sbjct: 80 HPNVIALHESIRNILLVANNENSL 103
>01_01_0908 +
7158172-7158356,7159436-7159866,7159953-7161061,
7161372-7162820
Length = 1057
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 406 AGTCGSQRRPIIQTELRVSTHCDWSSCN 489
A TCG+Q RP IQ STH SS N
Sbjct: 769 AATCGAQFRPGIQAVDLTSTHVMGSSSN 796
>06_02_0086 -
11567390-11567634,11568316-11568341,11571082-11571224,
11571569-11571682,11571855-11572888,11574723-11575047,
11576843-11577124
Length = 722
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 42 SSRSSTGSEVVMMNERAVASALCTAVPTVSNLNVTKTTGLHIGPKFV 182
+S+ +TG + MN AVAS T PT+ + N+ K T L+ P V
Sbjct: 125 ASKPTTG---LPMNISAVASFPVTTPPTIPSPNILKQTQLNESPSGV 168
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 95 RFRPL-YRSTHSIQPQRDQDYRPSHRPKVRVRHSECAQQRSGQR 223
R+RP +R H Q QR +R H + R H QQR G R
Sbjct: 120 RWRPRDHRDQHDHQSQRHH-HRHHHHQRQRHHHHHQRQQRRGSR 162
>11_02_0055 - 7819391-7820098,7820202-7820534,7820930-7821103
Length = 404
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 170 PKVR-VRHSECAQQRSGQRFAPTTLSV 247
PK+R +RH + +RSG+R A +SV
Sbjct: 309 PKLRPIRHKKAKDERSGKRLASEAISV 335
>04_03_0329 - 14454840-14454862,14483886-14485630,14485843-14486648
Length = 857
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +2
Query: 5 VERK*RRTGTRAEQPVEHRLRSGDDERESGRFRPLYRSTHSIQPQRDQDYRPSHRPKVRV 184
+E K + + + R + G ++R R+ Y S Q Q+ Q RP+ RP+ V
Sbjct: 521 LEAKHKELESHKRRLANFRNQQGANQRV--RYTNPYPGGSSSQQQQQQQPRPAPRPQFVV 578
Query: 185 RHSECAQQRSGQ 220
R + QQ++ Q
Sbjct: 579 RVPQPQQQQNQQ 590
>02_04_0240 -
21194597-21194743,21195579-21195680,21195797-21195875,
21195921-21196043,21196135-21196193,21196453-21196974,
21197434-21198177,21198426-21198506
Length = 618
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 255 AKNSSRAERLSCAAALVALITCVGLIVYFTINA-KDTSGTSIDIAPHE 395
A +S+R+ LSC + L L + VG++ Y T A K ++G ++ + E
Sbjct: 492 APSSARSISLSCYSGLDVLSSSVGILPYKTAKAPKISNGNNVVVKQTE 539
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,801,528
Number of Sequences: 37544
Number of extensions: 402551
Number of successful extensions: 1404
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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