Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_P13
         (648 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    26   0.36 
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    24   1.5  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    23   3.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.4  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 624 RTPFHRCQS*SCKEYRSQAF*GSKFVVYAAQR 529
           RTP     S +CK+ +  A  GS+F +Y A +
Sbjct: 569 RTPSVMSASSTCKKDKKNAGSGSRFTIYKANK 600


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +2

Query: 56  HRLRSGDDERESGRFRPLYRSTHSIQPQRDQDYRP 160
           H L SG  E      RP    + ++Q  +DQDY+P
Sbjct: 409 HALTSGKCEH-----RPFEPKSTAVQKYQDQDYQP 438


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +3

Query: 138 NVTKTTGLHIGPKFVSVTQNVHNNEVVKDLPLPRYLW 248
           N+T+   ++ G  FV +      N+++K     R++W
Sbjct: 47  NMTEKVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIW 83


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +3

Query: 519 IICAAELRTLQTYFLRTLGYDIPYN 593
           I+   E++ + TY ++   +D+ YN
Sbjct: 249 ILAKKEIKGVPTYLIKWKNWDLKYN 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,983
Number of Sequences: 438
Number of extensions: 4469
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)