Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_P11
(290 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 74 1e-14
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 74 1e-14
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 74 1e-14
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 53 4e-08
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 53 4e-08
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 53 4e-08
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 53 4e-08
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 48 8e-07
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 27 2.2
U40798-7|AAA81477.1| 342|Caenorhabditis elegans Hypothetical pr... 26 5.2
AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transport... 26 5.2
Z81476-4|CAB03923.1| 707|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z81140-4|CAJ55247.1| 463|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z81140-3|CAJ55246.1| 453|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical pr... 25 9.1
Z71265-4|CAA95833.1| 417|Caenorhabditis elegans Hypothetical pr... 25 9.1
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 25 9.1
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 74.1 bits (174), Expect = 1e-14
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +1
Query: 100 VPPEFLIKHPLQNTWSLWFYDNDXNKTWEENLIELTTFDTVEDFWRLYPSXQT 258
VPPE L +HPLQN W+LW+ D NK WE+ L ++ FDTVEDFW LY Q+
Sbjct: 24 VPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQS 76
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 74.1 bits (174), Expect = 1e-14
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +1
Query: 100 VPPEFLIKHPLQNTWSLWFYDNDXNKTWEENLIELTTFDTVEDFWRLYPSXQT 258
VPPE L +HPLQN W+LW+ D NK WE+ L ++ FDTVEDFW LY Q+
Sbjct: 24 VPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQS 76
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 74.1 bits (174), Expect = 1e-14
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +1
Query: 100 VPPEFLIKHPLQNTWSLWFYDNDXNKTWEENLIELTTFDTVEDFWRLYPSXQT 258
VPPE L +HPLQN W+LW+ D NK WE+ L ++ FDTVEDFW LY Q+
Sbjct: 24 VPPELLTRHPLQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQS 76
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 52.8 bits (121), Expect = 4e-08
Identities = 17/40 (42%), Positives = 30/40 (75%)
Frame = +1
Query: 124 HPLQNTWSLWFYDNDXNKTWEENLIELTTFDTVEDFWRLY 243
+PL+ W+ W+ +++ NK+WE+ L ++ TF+TV +FW LY
Sbjct: 12 YPLKRNWTWWYLNDERNKSWEDRLKKVYTFNTVSEFWALY 51
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 52.8 bits (121), Expect = 4e-08
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +1
Query: 124 HPLQNTWSLWFYDNDXNKTWEENLIELTTFDTVEDFWRLY 243
+PLQ WS WF ++D N +W++ L ++ TF+TV +FW Y
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFY 48
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 52.8 bits (121), Expect = 4e-08
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +1
Query: 124 HPLQNTWSLWFYDNDXNKTWEENLIELTTFDTVEDFWRLY 243
+PLQ WS WF ++D N +W++ L ++ TF+TV +FW Y
Sbjct: 48 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFY 87
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 52.8 bits (121), Expect = 4e-08
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +1
Query: 124 HPLQNTWSLWFYDNDXNKTWEENLIELTTFDTVEDFWRLY 243
+PLQ WS WF ++D N +W++ L ++ TF+TV +FW Y
Sbjct: 9 YPLQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFY 48
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 48.4 bits (110), Expect = 8e-07
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +1
Query: 118 IKHP---LQNTWSLWFYDNDXNKTWEENLIELTTFDTVEDFWRLYPS 249
I HP L+ W+ W+ +++ NK+WEE L + TF +V +FW L+ S
Sbjct: 12 ISHPVYKLKRNWTWWYLNDERNKSWEERLKNVKTFSSVGEFWALHDS 58
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.1 bits (57), Expect = 2.2
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 154 FYDNDXNK--TWEENLIELTTFDTVEDFWRLYP 246
+ D + N TW+++ L T+ +EDF+ YP
Sbjct: 1769 YQDKNVNNDTTWDDDKTALDTYTALEDFFVTYP 1801
>U40798-7|AAA81477.1| 342|Caenorhabditis elegans Hypothetical
protein R13A1.8 protein.
Length = 342
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 184 EENLIELTTFDTVEDFWRLYPSXQTTVRVT 273
EENLI+ + + V D WRL S + +
Sbjct: 157 EENLIDKESCEVVADSWRLVESRSSAAETS 186
>AF003138-6|ABE73338.1| 1551|Caenorhabditis elegans Abc transporter
family protein 2 protein.
Length = 1551
Score = 25.8 bits (54), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -3
Query: 150 ETPGVL--QRVLYQEFRRHLCISVGFSLRRSRSFYIFCIIP 34
E P +L +R+++Q F L + ++L+ R+F IIP
Sbjct: 542 EKPDLLDGKRLIFQHFYALLVCRINYTLKSKRTFLFQVIIP 582
>Z81476-4|CAB03923.1| 707|Caenorhabditis elegans Hypothetical
protein C25F9.5 protein.
Length = 707
Score = 25.0 bits (52), Expect = 9.1
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 154 FYDNDXNKTWEENLIELTTFDTVEDFWRLY 243
+Y N+ K+ +++ +TT+D E ++ Y
Sbjct: 307 YYGNETKKSNNSHVVVITTYDRFEKSYKKY 336
>Z81140-4|CAJ55247.1| 463|Caenorhabditis elegans Hypothetical
protein W10G6.2b protein.
Length = 463
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/36 (27%), Positives = 15/36 (41%)
Frame = +1
Query: 46 EDVEGSAXXXXXXXXXXXVPPEFLIKHPLQNTWSLW 153
ED++GS + PE ++K P T W
Sbjct: 283 EDMQGSKTTSTFCGTPEYLAPEIILKKPYDKTVDWW 318
>Z81140-3|CAJ55246.1| 453|Caenorhabditis elegans Hypothetical
protein W10G6.2a protein.
Length = 453
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/36 (27%), Positives = 15/36 (41%)
Frame = +1
Query: 46 EDVEGSAXXXXXXXXXXXVPPEFLIKHPLQNTWSLW 153
ED++GS + PE ++K P T W
Sbjct: 273 EDMQGSKTTSTFCGTPEYLAPEIILKKPYDKTVDWW 308
>Z75527-1|CAA99774.1| 441|Caenorhabditis elegans Hypothetical
protein C15C8.1 protein.
Length = 441
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 148 LWFYDNDXNKTWEENLIELTTFDTVEDFWRLY 243
LW D++ + I+L TFDTV F L+
Sbjct: 269 LWNSDDEKTVYYTALAIQLLTFDTVRLFMSLF 300
>Z71265-4|CAA95833.1| 417|Caenorhabditis elegans Hypothetical
protein M05B5.4 protein.
Length = 417
Score = 25.0 bits (52), Expect = 9.1
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = +1
Query: 115 LIKHPLQNTWSLWFYDNDXNKTWEENLI 198
L+ H + N SL+F +N ++ W++ I
Sbjct: 192 LVGHSMGNPLSLYFLNNYVDQAWKDKYI 219
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 25.0 bits (52), Expect = 9.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 115 LIKHPLQNTWSLWFYDN 165
L HPL WS+W++ N
Sbjct: 177 LAHHPLLFKWSVWYHGN 193
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,476,677
Number of Sequences: 27780
Number of extensions: 110559
Number of successful extensions: 245
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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