Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_P09
(507 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical ... 31 0.36
Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical pr... 31 0.48
AL021469-1|CAA16287.1| 207|Caenorhabditis elegans Hypothetical ... 31 0.48
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 29 1.5
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 29 1.5
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 29 1.5
U64859-1|AAC69092.2| 468|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical pr... 29 2.6
U00036-16|AAK29860.1| 233|Caenorhabditis elegans Hypothetical p... 29 2.6
AF143147-1|AAD37862.1| 233|Caenorhabditis elegans R151.8A prote... 29 2.6
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 3.4
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 28 3.4
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 3.4
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 3.4
Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical pr... 28 4.5
L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protei... 28 4.5
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 27 5.9
AC006816-2|AAK85508.1| 352|Caenorhabditis elegans Hypothetical ... 27 5.9
AC006816-1|AAN39661.1| 401|Caenorhabditis elegans Hypothetical ... 27 5.9
AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical ... 27 5.9
AB071420-1|BAB86940.1| 401|Caenorhabditis elegans 2-amino-3-car... 27 5.9
Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical pr... 27 7.8
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 27 7.8
AY494975-1|AAR87492.1| 486|Caenorhabditis elegans collagen/olfa... 27 7.8
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 27 7.8
AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin (col... 27 7.8
>AL032625-4|CAB63350.2| 792|Caenorhabditis elegans Hypothetical
protein Y37H9A.3 protein.
Length = 792
Score = 31.5 bits (68), Expect = 0.36
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 456 SSSHRVPNVLPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSA 313
SS+ P P P A AH PP + AH+A +P P R +SA
Sbjct: 198 SSAAAEPLPPPAPTAQPAHH-PPAPPIRQAAHAAESSPPPIPQRKSSA 244
>Z81543-3|CAB04425.1| 322|Caenorhabditis elegans Hypothetical
protein F49B2.3 protein.
Length = 322
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 396 GPPGADTHRPAHSAGGTPSPTRARTNS 316
GP GA HRP HSAG T R R ++
Sbjct: 72 GPRGARDHRPRHSAGNTTLLPRRRPHA 98
>AL021469-1|CAA16287.1| 207|Caenorhabditis elegans Hypothetical
protein Y116A8B.1 protein.
Length = 207
Score = 31.1 bits (67), Expect = 0.48
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 396 GPPGADTHRPAHSAGGTPSPTRARTNS 316
GP GA HRP HSAG T R R ++
Sbjct: 70 GPRGARDHRPRHSAGNTTLLPRRRPHA 96
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/65 (27%), Positives = 26/65 (40%)
Frame = -1
Query: 465 ETASSSHRVPNVLPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDRISGSST 286
+T SS + T PG+ RP+ +G T S + S SGSS
Sbjct: 783 QTPGSSVSTSAAILTSTQQSVSTNSPGSTVTRPSTVSGSTSSGSTVTVGSTEASTSGSSV 842
Query: 285 S*ASP 271
+ +SP
Sbjct: 843 ASSSP 847
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -1
Query: 429 LPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDRISGSSTS*ASPIRDGMNR 250
+P PA + G P A RPA + G PTR +A + +S + A P R R
Sbjct: 228 IPAPAVPRPVAGKPSA---RPATTTGTATRPTRPAVPAASAPRALTSRAPAGPSRPTTTR 284
Query: 249 RVA 241
A
Sbjct: 285 NAA 287
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -1
Query: 429 LPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDRISGSSTS*ASPIRDGMNR 250
+P PA + G P A RPA + G PTR +A + +S + A P R R
Sbjct: 228 IPAPAVPRPVAGKPSA---RPATTTGTATRPTRPAVPAASAPRALTSRAPAGPSRPTTTR 284
Query: 249 RVA 241
A
Sbjct: 285 NAA 287
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -1
Query: 429 LPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDRISGSSTS*ASPIRDGMNR 250
+P PA + G P A RPA + G PTR +A + +S + A P R R
Sbjct: 228 IPAPAVPRPVAGKPSA---RPATTTGTATRPTRPAVPAASAPRALTSRAPAGPSRPTTTR 284
Query: 249 RVA 241
A
Sbjct: 285 NAA 287
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -1
Query: 465 ETASSSHRVPNVLPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDRISGSST 286
+ + +S R P+ LP P + T + +P+P+R + +SAG SG++
Sbjct: 293 QVSGASKRKPDGLPPPGGDEKKLRAGSPSTRKSPSRKSASPTPSR-KGSSAGGAASGTTG 351
Query: 285 S*AS 274
+ AS
Sbjct: 352 ASAS 355
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -1
Query: 465 ETASSSHRVPNVLPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDRISGSST 286
+ + +S R P+ LP P + T + +P+P+R + +SAG SG++
Sbjct: 293 QVSGASKRKPDGLPPPGGDEKKLRAGSPSTRKSPSRKSASPTPSR-KGSSAGGAASGTTG 351
Query: 285 S*AS 274
+ AS
Sbjct: 352 ASAS 355
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -1
Query: 465 ETASSSHRVPNVLPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDRISGSST 286
+ + +S R P+ LP P + T + +P+P+R + +SAG SG++
Sbjct: 293 QVSGASKRKPDGLPPPGGDEKKLRAGSPSTRKSPSRKSASPTPSR-KGSSAGGAASGTTG 351
Query: 285 S*AS 274
+ AS
Sbjct: 352 ASAS 355
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = -1
Query: 465 ETASSSHRVPNVLPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDRISGSST 286
+ + +S R P+ LP P + T + +P+P+R + +SAG SG++
Sbjct: 293 QVSGASKRKPDGLPPPGGDEKKLRAGSPSTRKSPSRKSASPTPSR-KGSSAGGAASGTTG 351
Query: 285 S*AS 274
+ AS
Sbjct: 352 ASAS 355
>U64859-1|AAC69092.2| 468|Caenorhabditis elegans Hypothetical
protein R09F10.3 protein.
Length = 468
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = -1
Query: 474 SRQETASSSHRVPNVLPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDRISG 295
S E +S +V PV A +H P + PA G +P ART S+ G
Sbjct: 19 SSSEPVTSPSSASHV-PVQTAPASHGAPSSVASQPPASVDGKAGAPDEARTASSASNPQG 77
Query: 294 S 292
S
Sbjct: 78 S 78
>Z73427-5|CAA97803.1| 917|Caenorhabditis elegans Hypothetical
protein F58B3.5 protein.
Length = 917
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -1
Query: 465 ETASSSHRVPNVLPVPAASKAHTGPP--GADTHRPAHSAGGTPSPTRARTNSAGDRISGS 292
ETA+ +VP PV + + T P G T P A TP+P+ + A ++ G
Sbjct: 688 ETAAGIKQVPK--PVVSCTPTPTSTPASGIITEAPKKEAPSTPAPSEPK--KAKEQKKGK 743
Query: 291 STS*ASPIRD 262
+ A+P+ D
Sbjct: 744 GGAAAAPVDD 753
>Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical
protein M05B5.3 protein.
Length = 403
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -1
Query: 462 TASSSHRVPNVLPVP-AASKAHTGPPGADTHR----PAHSAGGTPSPTRARTNSAGDRI 301
T +SS PN AAS TG +DT P +A G P+P +S GD+I
Sbjct: 244 TVTSSTSDPNAPTASDAASGTGTGTESSDTPASSAPPTSAASGPPAPKSNDKDSTGDKI 302
>U00036-16|AAK29860.1| 233|Caenorhabditis elegans Hypothetical
protein R151.10 protein.
Length = 233
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 296 PEMRSPAELVRARVGEGVPPALCAGRC 376
P M +LVR + GVP ALC G C
Sbjct: 89 PAMPGAEKLVRHLLHTGVPVALCTGSC 115
>AF143147-1|AAD37862.1| 233|Caenorhabditis elegans R151.8A protein
protein.
Length = 233
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 296 PEMRSPAELVRARVGEGVPPALCAGRC 376
P M +LVR + GVP ALC G C
Sbjct: 89 PAMPGAEKLVRHLLHTGVPVALCTGSC 115
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 28.3 bits (60), Expect = 3.4
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Frame = +2
Query: 128 KDVLCVVNQYWDNQLEMINGKLLLLYVVLATACYEIQSATLRF-IPSRMG---DAYEVDE 295
+DV VVN + + N + + + + + SA +R IPS + + V +
Sbjct: 980 EDVNTVVNVFGEGFPITNNNSYICTFGRTSVTGHRVSSALIRCPIPSNLTLGRHVFGVSQ 1039
Query: 296 PEM-----RSPAELVRARVGEGVPPALCAGRCVSAPGGPVCAFDAAGTG 427
P + S + + + +G P+LC G CV GP+C TG
Sbjct: 1040 PGLLSAIGNSEPKPIHFTLYDGCEPSLCQGSCV----GPLCICPQGKTG 1084
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -1
Query: 468 QETASSSHRVPNVLPVPAASKAHTGPPGADTHRPAHSAGGTPSPTR 331
+E A P+ +P S H P GA A S+ TP PT+
Sbjct: 464 KEPAVPIRHSPSQMPTHLQSPVHPSPNGAPPAYNAPSSSKTPDPTQ 509
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -1
Query: 468 QETASSSHRVPNVLPVPAASKAHTGPPGADTHRPAHSAGGTPSPTR 331
+E A P+ +P S H P GA A S+ TP PT+
Sbjct: 464 KEPAVPIRHSPSQMPTHLQSPVHPSPNGAPPAYNAPSSSKTPDPTQ 509
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 164 NQLEMINGKLLLLYVVLATACYEIQSA--TLRFIPSRMGDA 280
N E++NG ++ + AT C E+ S+ T+ +IP G+A
Sbjct: 1115 NDKEVLNGNAVIHHCPYATFCRELVSSEGTIPYIPLEKGEA 1155
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 164 NQLEMINGKLLLLYVVLATACYEIQSA--TLRFIPSRMGDA 280
N E++NG ++ + AT C E+ S+ T+ +IP G+A
Sbjct: 1115 NDKEVLNGNAVIHHCPYATFCRELVSSEGTIPYIPLEKGEA 1155
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Frame = +2
Query: 350 PPALCAGRCVSAPGGPVCAFDAAGT-GRTFGTLCELEAVSCRESTYYAITSLG 505
P +C C G V G+ G T+ LCEL+ +C+ S+G
Sbjct: 798 PDCICPQSCNMNHLGIVANMTVCGSDGTTYSNLCELKMFACKHQIDVVPVSMG 850
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 164 NQLEMINGKLLLLYVVLATACYEIQSA--TLRFIPSRMGDA 280
N E++NG ++ + AT C E+ S+ T+ +IP G+A
Sbjct: 1115 NDKEVLNGNAVIHHCPYATFCRELVSSEGTIPYIPLEKGEA 1155
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +2
Query: 164 NQLEMINGKLLLLYVVLATACYEIQSA--TLRFIPSRMGDA 280
N E++NG ++ + AT C E+ S+ T+ +IP G+A
Sbjct: 1115 NDKEVLNGNAVIHHCPYATFCRELVSSEGTIPYIPLEKGEA 1155
>Z77662-5|CAB01192.2| 579|Caenorhabditis elegans Hypothetical
protein F47B8.5 protein.
Length = 579
Score = 27.9 bits (59), Expect = 4.5
Identities = 21/69 (30%), Positives = 25/69 (36%)
Frame = -1
Query: 465 ETASSSHRVPNVLPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDRISGSST 286
E A + P P PA A P A PA P+P A D SG S+
Sbjct: 496 EAAPAPEPAPAPAPAPAPEAAPAAAPDAAPAEPAPVPEVAPAPAPAPAAPESD-ASGYSS 554
Query: 285 S*ASPIRDG 259
A+P G
Sbjct: 555 GAAAPAGGG 563
>L11247-3|AAA28008.1| 278|Caenorhabditis elegans Collagen protein
91 protein.
Length = 278
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = -1
Query: 420 PAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDRISGSSTS*ASPIRDG 259
PA + GP G D A GG P P AGD +G+ + +P DG
Sbjct: 141 PAGAPGAPGPAGPDGQPGADGQGGAPGPA-GPEGPAGD--AGAPGAPGAPGNDG 191
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 420 PAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDRISGSSTS 283
PA H G P + H P TP+PT A T S I + T+
Sbjct: 60 PALPAPHPGIPSSSYHPPV----STPTPTAAPTTSLSSTIVRNMTA 101
>AC006816-2|AAK85508.1| 352|Caenorhabditis elegans Hypothetical
protein Y71D11A.3a protein.
Length = 352
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +2
Query: 323 VRARVGEG--VPPALCAGRCVSAP 388
+R RV G V P LCAG+C AP
Sbjct: 244 IRGRVSHGWNVRPDLCAGKCKVAP 267
>AC006816-1|AAN39661.1| 401|Caenorhabditis elegans Hypothetical
protein Y71D11A.3b protein.
Length = 401
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +2
Query: 323 VRARVGEG--VPPALCAGRCVSAP 388
+R RV G V P LCAG+C AP
Sbjct: 293 IRGRVSHGWNVRPDLCAGKCKVAP 316
>AC006672-7|AAM98004.1| 668|Caenorhabditis elegans Hypothetical
protein K08D12.6 protein.
Length = 668
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 444 RVPNVLPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGD 307
+ P +P PA + A G+ PA + T S R++ N+ GD
Sbjct: 314 QAPVAVPAPAPAAAPAPDCGSAAPAPAAAPAATDSGYRSKRNAYGD 359
>AB071420-1|BAB86940.1| 401|Caenorhabditis elegans
2-amino-3-carboxylmuconate-6-semialdehydedecarboxylase
protein.
Length = 401
Score = 27.5 bits (58), Expect = 5.9
Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = +2
Query: 323 VRARVGEG--VPPALCAGRCVSAP 388
+R RV G V P LCAG+C AP
Sbjct: 293 IRGRVSHGWNVRPDLCAGKCKVAP 316
>Z50029-9|CAA90345.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 426 PVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDR 304
P+P++S H PG + P+ S+ +PT + +NS D+
Sbjct: 557 PMPSSSSQHQ--PGTSSSGPSTSSSIASTPTPSTSNSLFDK 595
>Z50028-6|CAA90339.4| 1012|Caenorhabditis elegans Hypothetical
protein F46F6.2 protein.
Length = 1012
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 426 PVPAASKAHTGPPGADTHRPAHSAGGTPSPTRARTNSAGDR 304
P+P++S H PG + P+ S+ +PT + +NS D+
Sbjct: 557 PMPSSSSQHQ--PGTSSSGPSTSSSIASTPTPSTSNSLFDK 595
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -1
Query: 426 PVPAASKAH-TGPPGADTHRPAHSAGGTPSPTRA 328
P PAA + T P +T PA +A TP+P A
Sbjct: 585 PAPAAEETPATAPAAEETPAPAPAADETPAPAPA 618
>AY494975-1|AAR87492.1| 486|Caenorhabditis elegans
collagen/olfactomedin domain containingprotein 2
protein.
Length = 486
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 164 YPNTDSPHTKRLFNYYKIVNRVYFTTYANSMRIYDRYY 51
Y NT S + N YK N + + Y + IYD Y
Sbjct: 436 YRNTYSQPLIKWINLYKNANMISYNAYDKRIYIYDHGY 473
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = -1
Query: 459 ASSSHRVPNVLPVPAASKAHTGPPGADTHRPAHSAGGTPSPTRAR 325
+ S R P LP P K GPPG + G P P R
Sbjct: 474 SQSGPRGPPGLPGPPGEKGDLGPPGLPGQPGSLGLPGPPGPMGLR 518
>AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin
(collagen plus olfactomedin)family protein 2 protein.
Length = 486
Score = 27.1 bits (57), Expect = 7.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = -2
Query: 164 YPNTDSPHTKRLFNYYKIVNRVYFTTYANSMRIYDRYY 51
Y NT S + N YK N + + Y + IYD Y
Sbjct: 436 YRNTYSQPLIKWINLYKNANMISYNAYDKRIYIYDHGY 473
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,456,229
Number of Sequences: 27780
Number of extensions: 247801
Number of successful extensions: 1288
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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