Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_P06
         (669 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   3.5  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   3.5  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   6.1  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   6.1  

>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = -3

Query: 484 NNYTFNLHSGYFRLFNGFTKIQSVSGIITYYY*N 383
           NNY +N ++   +L+     I+ +   +  YY N
Sbjct: 94  NNYKYNYNNNCKKLYYNINYIEQIPIPVPVYYGN 127


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 25  LSRDKSELVNKF*YFKENVEQTDHEKHK 108
           +S ++ EL+++  YF+   EQ   E  K
Sbjct: 331 ISPEQEELIHRLVYFQNEYEQPSEEDLK 358


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -3

Query: 211 YHLIPIV-MTRCFGCNAAEQCSDHPT 137
           Y L+ I+ M+   GC     CS HPT
Sbjct: 100 YILMAILRMSADGGCRNFSTCSSHPT 125


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -3

Query: 211 YHLIPIV-MTRCFGCNAAEQCSDHPT 137
           Y L+ I+ M+   GC     CS HPT
Sbjct: 99  YILMAILRMSADGGCRNFSTCSSHPT 124


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,172
Number of Sequences: 438
Number of extensions: 5553
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)