Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_P05
(371 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0264 + 2030080-2031270 157 3e-39
01_03_0090 - 12347165-12348349 157 3e-39
01_02_0051 - 10655867-10657057 152 7e-38
12_01_0128 - 967720-968247,969327-969596 32 0.13
03_05_0591 + 25924907-25925518 30 0.67
11_01_0234 + 1804581-1805357,1805941-1806447 29 1.5
12_02_0995 + 25104303-25104486,25105164-25105275,25106466-251065... 27 3.6
10_02_0138 - 5745893-5745924,5746824-5747580 27 3.6
07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893 27 3.6
01_06_0379 - 28871406-28871924 27 4.7
12_02_0166 - 14794892-14795191,14795750-14796544 27 6.2
04_03_0103 + 11288977-11290353,11291962-11292075,11294987-112954... 27 6.2
06_01_1083 - 8859190-8859450,8859555-8859626 26 8.2
05_03_0299 - 11959441-11959541,11959720-11959777 26 8.2
04_03_0060 - 10511421-10512494 26 8.2
03_05_0222 + 22082863-22082938,22083261-22083333,22083451-220834... 26 8.2
01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755 26 8.2
>05_01_0264 + 2030080-2031270
Length = 396
Score = 157 bits (381), Expect = 3e-39
Identities = 74/123 (60%), Positives = 87/123 (70%)
Frame = +2
Query: 2 YLDEKTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVDRSA 181
YLDEKT+ H+NP G F+IGGP DAGLTGRKII+DTY KD TKVDRS
Sbjct: 226 YLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSG 285
Query: 182 AYAARWVAKSLVKAGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVKKNFD 361
AY AR AKS+V +GL RRC+VQV+YAIGV EPLS+ V YGT +++L IVK+NFD
Sbjct: 286 AYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENFD 345
Query: 362 LRP 370
RP
Sbjct: 346 FRP 348
>01_03_0090 - 12347165-12348349
Length = 394
Score = 157 bits (380), Expect = 3e-39
Identities = 74/123 (60%), Positives = 87/123 (70%)
Frame = +2
Query: 2 YLDEKTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVDRSA 181
YLDEKT+ H+NP G F+IGGP DAGLTGRKII+DTY KD TKVDRS
Sbjct: 225 YLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSG 284
Query: 182 AYAARWVAKSLVKAGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVKKNFD 361
AY AR AKS+V +GL RRC+VQV+YAIGV EPLS+ V YGT +++L IVK+NFD
Sbjct: 285 AYIARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFD 344
Query: 362 LRP 370
RP
Sbjct: 345 FRP 347
>01_02_0051 - 10655867-10657057
Length = 396
Score = 152 bits (369), Expect = 7e-38
Identities = 73/123 (59%), Positives = 85/123 (69%)
Frame = +2
Query: 2 YLDEKTVIHINPCGLFIIGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVDRSA 181
YLDEKT+ H+NP G F+IGGP DAGLTGRKII+DTY KD TKVDRS
Sbjct: 226 YLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSG 285
Query: 182 AYAARWVAKSLVKAGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVKKNFD 361
AY AR AKS+V GL RRC+VQV+YAIGV EPLS+ V YGT +++L IV +NFD
Sbjct: 286 AYIARQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILRIVTENFD 345
Query: 362 LRP 370
RP
Sbjct: 346 FRP 348
>12_01_0128 - 967720-968247,969327-969596
Length = 265
Score = 32.3 bits (70), Expect = 0.13
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -2
Query: 148 GESAPTMSSPPTIRIDDDLTSSQTSVRLRSTNDEESARVDVDNS 17
G+S P S P+ RID S S ++R +N EE+AR+ N+
Sbjct: 147 GDSQPDASPSPSFRIDG--CFSMRSCKIRGSNGEEAARITRKNA 188
>03_05_0591 + 25924907-25925518
Length = 203
Score = 29.9 bits (64), Expect = 0.67
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 235 PLHGSGRIRHWSCRATLNYRIRLRHFAQNTTTASLHCKEE 354
P +GR+R CRA++ YR+ H+ + T ++ E
Sbjct: 89 PESETGRLRSGCCRASVGYRVAHAHWGRGVATRAVRAVAE 128
>11_01_0234 + 1804581-1805357,1805941-1806447
Length = 427
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = -2
Query: 202 DPSGSIGS*TVHLGEVLPGESAPTMSSPPTIRIDDDLTSSQTSVRLRSTNDEES--ARVD 29
DP G +H G +LP +S + +PPT + + + L T D E R D
Sbjct: 213 DPIRLAGGVQLHPGFILPEKSPSELENPPTPFMTQETVDKFVVLALPPTKDTEKFICRAD 272
Query: 28 VDNS 17
V S
Sbjct: 273 VYGS 276
>12_02_0995 +
25104303-25104486,25105164-25105275,25106466-25106554,
25106635-25106703,25106784-25106913,25107073-25107231,
25107364-25107736,25108070-25108182,25108429-25108624,
25108855-25109288,25109360-25109495,25109668-25111086
Length = 1137
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 127 SSPPTIRIDDDLTSSQTSVRLRSTNDEESARVDVDN 20
SSPP RI DDL+S + + N EE + + DN
Sbjct: 503 SSPPDDRILDDLSSQAEEITSNADNPEEVSDIS-DN 537
>10_02_0138 - 5745893-5745924,5746824-5747580
Length = 262
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 338 REAVVVFCAKCRSRIR*LRVALQLQWRMRPEPCSGGTVPP 219
REA+V++C C+S L+ Q M+ C+ PP
Sbjct: 177 REAIVIYCPSCKSEFAGKVGRLEQQVGMKCARCTEWLSPP 216
>07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893
Length = 342
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 211 TSEGGTVPPLHGSGRIRHWSCRATLNYRIRLRHFAQNTTTAS 336
TS GG PP + I S +TLN + L A TTT +
Sbjct: 216 TSSGGGAPPAPTAAVIPSVSSSSTLNSMVGLSPAATTTTTTT 257
>01_06_0379 - 28871406-28871924
Length = 172
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +1
Query: 220 GGTVPPLHGSGRIRHW-SCRATLNYRIRL 303
GGTVP GRI W + L YR+RL
Sbjct: 144 GGTVPAFEALGRIFTWLTSFFLLGYRVRL 172
>12_02_0166 - 14794892-14795191,14795750-14796544
Length = 364
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/53 (30%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = -3
Query: 297 NTVIESGSATPMAYAT*TMQRRHSPAF--TSDLATHLAA*AAERSTLVKSFPE 145
NTV+ G A+ A+ + R H F S L A + K+FPE
Sbjct: 172 NTVVNDGMASDSAFMMDILVREHGEVFQGISSLVDVAGGNGAAARAIAKAFPE 224
>04_03_0103 +
11288977-11290353,11291962-11292075,11294987-11295436,
11295813-11295910,11296023-11296206,11296979-11297068,
11301608-11301727,11301812-11302054,11302715-11302988,
11303237-11303357,11303591-11303849
Length = 1109
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 179 AAYAARWVAKSLVKAGLCRRCMVQVAYAIGVAEPLSITVF 298
+ Y RW + L +A ++ A A+G A+P+++TVF
Sbjct: 901 SGYNTRWALRVLARA-------MEGAAAVGAADPVAVTVF 933
>06_01_1083 - 8859190-8859450,8859555-8859626
Length = 110
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1
Query: 365 AGQSSSLQWREAVVVFCAKC 306
AG+ S+ Q+++A + FC KC
Sbjct: 57 AGRCSNTQYKKACLTFCNKC 76
>05_03_0299 - 11959441-11959541,11959720-11959777
Length = 52
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 112 WWVGSSWWGRFLREGLHQGG 171
WW+G SW R L E L + G
Sbjct: 13 WWLGWSWGCRVLTEMLDKAG 32
>04_03_0060 - 10511421-10512494
Length = 357
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 247 SGRIRHWSCRATLNYRIRLRHFAQNTTTASLHCKEEL 357
+G +R CRA++ YR+ H+ + T ++ E+
Sbjct: 269 TGGLRSRCCRASVGYRVAHVHWGRGVVTRAVRATAEV 305
>03_05_0222 +
22082863-22082938,22083261-22083333,22083451-22083496,
22083639-22083753,22083847-22083926,22084022-22084621,
22084718-22084822,22084916-22085248
Length = 475
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 124 SPPTIRIDDDLTSSQTSVRLRSTND 50
+PP I ID+D + T VR+ S N+
Sbjct: 47 NPPRIEIDNDSCNDATIVRVDSANE 71
>01_06_0708 + 31363851-31364063,31364314-31364439,31364646-31365755
Length = 482
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/22 (63%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -2
Query: 175 TVHLGEV-LPGESAPTMSSPPT 113
TV L E+ PGES P +SSPPT
Sbjct: 319 TVVLTELHSPGESDPRVSSPPT 340
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,351,661
Number of Sequences: 37544
Number of extensions: 249885
Number of successful extensions: 717
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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