Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_O20
         (306 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039047-11|AAB94230.1|  354|Caenorhabditis elegans Prion-like-(...    27   3.4  
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of...    26   4.5  
U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical p...    26   6.0  
U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical p...    26   6.0  
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ...    26   6.0  
Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical pr...    25   7.9  
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ...    25   7.9  
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ...    25   7.9  
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ...    25   7.9  
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.      25   7.9  

>AF039047-11|AAB94230.1|  354|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 51
           protein.
          Length = 354

 Score = 26.6 bits (56), Expect = 3.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 29  CTSLEWDVPPATPRDPHH 82
           C  LE + PP  PR  HH
Sbjct: 52  CVDLESNAPPPAPRQQHH 69


>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
           constitutive dauerformation protein 2 protein.
          Length = 1446

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 194 ILYLKCICTVRQVSCDIMDAKC 259
           +LY  C C  R+  CD+   KC
Sbjct: 150 VLYPDCYCGKREKHCDLSKEKC 171


>U88173-13|AAM15573.1| 1225|Caenorhabditis elegans Hypothetical
           protein F46F11.1b protein.
          Length = 1225

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 284 KPIIIS*VCTSRPLCHMTLDELYKCISNKE 195
           K +I   VCT  PL     ++L++C+ NKE
Sbjct: 785 KMVIAQRVCT--PLLRKIRNDLHRCLENKE 812


>U88173-12|AAK21388.1| 1339|Caenorhabditis elegans Hypothetical
           protein F46F11.1a protein.
          Length = 1339

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 284 KPIIIS*VCTSRPLCHMTLDELYKCISNKE 195
           K +I   VCT  PL     ++L++C+ NKE
Sbjct: 785 KMVIAQRVCT--PLLRKIRNDLHRCLENKE 812


>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
            protein Y71A12B.4 protein.
          Length = 1913

 Score = 25.8 bits (54), Expect = 6.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 230  LDELYKCISNKEWA*TKNMVNILVVFHNFFIEL 132
            L  LY+ +S KE    K+++N+ V   N  +EL
Sbjct: 1360 LSALYRDMSEKEKERAKDLLNVAVFSENMAVEL 1392


>Z75549-2|CAA99916.1|  313|Caenorhabditis elegans Hypothetical
           protein T19C4.2 protein.
          Length = 313

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = +2

Query: 182 LFMPILYLKCICTVRQVSCDI 244
           LF P++Y + +CT+  + C+I
Sbjct: 170 LFTPLIYFQGVCTLCSLICNI 190


>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
           protein Y47H9C.4c protein.
          Length = 1045

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 173 PYFLFMPILYLKCICTVRQVSCDIMDAKCK 262
           P   + P    +C C  R V CD  D KC+
Sbjct: 462 PLDFYGPNCAHQCQCNQRGVGCDGADGKCQ 491


>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
           protein Y47H9C.4b protein.
          Length = 1070

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 173 PYFLFMPILYLKCICTVRQVSCDIMDAKCK 262
           P   + P    +C C  R V CD  D KC+
Sbjct: 462 PLDFYGPNCAHQCQCNQRGVGCDGADGKCQ 491


>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
           protein Y47H9C.4a protein.
          Length = 1111

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 173 PYFLFMPILYLKCICTVRQVSCDIMDAKCK 262
           P   + P    +C C  R V CD  D KC+
Sbjct: 462 PLDFYGPNCAHQCQCNQRGVGCDGADGKCQ 491


>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
          Length = 1111

 Score = 25.4 bits (53), Expect = 7.9
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 173 PYFLFMPILYLKCICTVRQVSCDIMDAKCK 262
           P   + P    +C C  R V CD  D KC+
Sbjct: 462 PLDFYGPNCAHQCQCNQRGVGCDGADGKCQ 491


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,401,519
Number of Sequences: 27780
Number of extensions: 134761
Number of successful extensions: 312
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 323034540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)