Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_O18
         (369 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   0.28 
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   6.1  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   6.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   8.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   8.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   8.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   8.1  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 25.0 bits (52), Expect = 0.28
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +2

Query: 53  CAENCISTPEYNPVCGSDNKTYKNQGRLF-CAQNCGVKVTLARQAPC 190
           C   C     + PVC S+ K Y N   L   A + G  +T +R   C
Sbjct: 106 CMRKC--PRRHRPVCASNGKIYANHCELHRAACHSGSSLTKSRLMRC 150


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase
          domain protein protein.
          Length = 448

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 39 KQLRNARRIAFQHQN 83
          K+LRN  + AF H N
Sbjct: 15 KELRNLAQQAFAHSN 29


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 113 TYKNQGRLFCAQNC 154
           TY++ G   C +NC
Sbjct: 155 TYQSNGEEVCLENC 168


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 5/7 (71%), Positives = 5/7 (71%)
 Frame = +1

Query: 265 CNPGNWP 285
           C PG WP
Sbjct: 488 CGPGKWP 494



 Score = 20.2 bits (40), Expect = 8.1
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 66  AFQHQNTTPCVVAIIKLTKTREDYFVPKI 152
           A + Q TT CV   +  T T    + PKI
Sbjct: 732 AHETQITTLCVAISLSATVTLVCLYSPKI 760


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 95  TRGCILVLKCNSP 57
           +RGC  VL+C  P
Sbjct: 143 SRGCTAVLRCVVP 155


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 95  TRGCILVLKCNSP 57
           +RGC  VL+C  P
Sbjct: 143 SRGCTAVLRCVVP 155


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 5/7 (71%), Positives = 5/7 (71%)
 Frame = +1

Query: 265 CNPGNWP 285
           C PG WP
Sbjct: 578 CGPGKWP 584



 Score = 20.2 bits (40), Expect = 8.1
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 66  AFQHQNTTPCVVAIIKLTKTREDYFVPKI 152
           A + Q TT CV   +  T T    + PKI
Sbjct: 822 AHETQITTLCVAISLSATVTLVCLYSPKI 850


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,997
Number of Sequences: 438
Number of extensions: 2463
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)