Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_O12
(627 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB040899-1|BAA95990.1| 505|Homo sapiens KIAA1466 protein protein. 75 3e-13
AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein. 58 2e-08
AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein. 55 2e-07
AK057704-1|BAB71549.1| 120|Homo sapiens protein ( Homo sapiens ... 53 1e-06
AK131351-1|BAD18506.1| 149|Homo sapiens PRECURSOR (EC 1.3.5.1).... 50 5e-06
AK131226-1|BAD18411.1| 194|Homo sapiens protein ( Homo sapiens ... 40 0.007
BC033390-1|AAH33390.1| 439|Homo sapiens KRBA2 protein protein. 37 0.067
AK131219-1|BAD18406.1| 492|Homo sapiens protein ( Homo sapiens ... 37 0.067
BC111742-1|AAI11743.1| 1325|Homo sapiens zinc finger protein 452... 36 0.16
BC111741-1|AAI11742.1| 1325|Homo sapiens zinc finger protein 452... 36 0.16
BC110834-1|AAI10835.1| 1325|Homo sapiens zinc finger protein 452... 36 0.16
AY517631-1|AAS01734.1| 1325|Homo sapiens zinc finger protein 452... 36 0.16
AL671879-1|CAI17641.2| 794|Homo sapiens zinc finger protein 452... 36 0.16
AK056369-1|BAB71166.1| 782|Homo sapiens protein ( Homo sapiens ... 36 0.16
AB067512-1|BAB67818.1| 1147|Homo sapiens KIAA1925 protein protein. 36 0.16
M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenou... 33 0.83
AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein. 33 0.83
AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein. 33 0.83
AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein. 33 0.83
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 33 0.83
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 33 0.83
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 33 0.83
AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein. 33 0.83
AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein. 33 0.83
AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein. 33 1.1
AK131478-1|BAD18623.1| 266|Homo sapiens protein ( Homo sapiens ... 31 4.4
>AB040899-1|BAA95990.1| 505|Homo sapiens KIAA1466 protein protein.
Length = 505
Score = 74.5 bits (175), Expect = 3e-13
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Frame = +2
Query: 17 LPISNGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQF 196
LP + G++Y L V F+ W E KA+ V + ++D I RFG P + +D G F
Sbjct: 287 LPRARGYQYMLVFVCTFSGWVEAFPTRIEKAQEVTRLLLKDIIPRFGLPLTLGSDNGPAF 346
Query: 197 ESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAI-MCHSDQ-NWYEVIPLILL 370
+ + ++LS+L + YHP ++G V+ ++ LK + C W +V+P+ L
Sbjct: 347 MAEVVQQLSQLLKIKWKLHIVYHPQSSGKVQWMNQTLKHLLKFCQEPHLRWDQVLPMAFL 406
Query: 371 GIRNAWKEDIGSSSAELVYG 430
+R + G S E+V+G
Sbjct: 407 QVRCTLTKLTGLSPCEIVFG 426
>AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein.
Length = 1183
Score = 58.4 bits (135), Expect = 2e-08
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Frame = +2
Query: 17 LPISNGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQF 196
+P G KY L V ++ +I + K + +RD I RFG P +I +D G F
Sbjct: 906 MPKCGGNKYLLVLVCTYSGGWRLIQHKLRKLVKLTCVLLRDPIPRFGLPLRIGSDNGPAF 965
Query: 197 ESYLFKELSKLTGSRHISTTAYHPAANGLVERFH---RQLKAAIMCHSDQNWYEVIPLIL 367
+ L ++ +K+ G+ AY P ++G VE+ + + K + + W + +P++L
Sbjct: 966 VADLVQKRAKVLGNTWKLHAAYRPQSSGKVEQMNWTIKNSKGKVCQETGLKWIQALPMVL 1025
Query: 368 LGIRNAWKEDIGSSSAELVY 427
IR + G S E++Y
Sbjct: 1026 FKIRCTPSKRTGYSPYEILY 1045
>AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein.
Length = 1819
Score = 54.8 bits (126), Expect = 2e-07
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 5/131 (3%)
Frame = +2
Query: 2 DIIGPLPISN-GFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITT 178
+++GP+ IS G K+ L D TRW E L+ VA+ ++ +R+G P ++
Sbjct: 1541 EVVGPVTISEEGHKHVLIVADPNTRWVEAFPLKPYTHTAVAQVLLQHVFARWGVPVRLEA 1600
Query: 179 DRGRQFESYLFKELSKLTGSR--HISTTAYHP--AANGLVERFHRQLKAAIMCHSDQNWY 346
+G QF ++ G++ +S P ++G F R LK I H + W
Sbjct: 1601 AQGPQFARHVLVSCGLALGAQVASLSRDLQFPCLTSSGAYWEFKRALKEFIFLHG-KKWA 1659
Query: 347 EVIPLILLGIR 379
+PL+ L R
Sbjct: 1660 ASLPLLHLAFR 1670
>AK057704-1|BAB71549.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ33142 fis, clone UTERU1000192. ).
Length = 120
Score = 52.8 bits (121), Expect = 1e-06
Identities = 29/101 (28%), Positives = 50/101 (49%)
Frame = +2
Query: 17 LPISNGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQF 196
+P G KY L + + W E KA V +RD I RFG P +I++D G F
Sbjct: 1 MPKCGGNKYLLVLLCTYCGWVEAYPTLTEKAREVTCVLLRDLIPRFGLPLRISSDNGLTF 60
Query: 197 ESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAI 319
+ L ++++K+ G AY P ++ E+ ++ +K ++
Sbjct: 61 VADLVQKIAKVLGIIWKLHAAYRPQSSRKAEQMNQTIKNSL 101
>AK131351-1|BAD18506.1| 149|Homo sapiens PRECURSOR (EC 1.3.5.1).
protein.
Length = 149
Score = 50.4 bits (115), Expect = 5e-06
Identities = 25/69 (36%), Positives = 35/69 (50%)
Frame = +2
Query: 20 PISNGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFE 199
P G+KY L VD F+ W E A ++ A V K + + I R+G P I +D G F
Sbjct: 76 PHQAGYKYLLVLVDTFSGWTEAFATKNETANLVVKFLLNEIIPRYGLPAAIGSDNGPAFT 135
Query: 200 SYLFKELSK 226
S + +SK
Sbjct: 136 SSIVLSVSK 144
>AK131226-1|BAD18411.1| 194|Homo sapiens protein ( Homo sapiens
cDNA FLJ16127 fis, clone BRACE2037299. ).
Length = 194
Score = 39.9 bits (89), Expect = 0.007
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +2
Query: 212 KELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIMCHSDQ---NWYEVIPLILLGIRN 382
K+ +L+ S YHP++ G VER + LK + S Q +W ++P LL IR
Sbjct: 11 KQSPRLSASSGNFIPPYHPSSLGKVERTNGLLKTHLTKLSLQLKKDWTALLPFALLRIRA 70
Query: 383 AWKEDIGSSSAELVYGETLKLPSDFFLASSVAEV 484
+E G S EL YG T L + ++ A++
Sbjct: 71 YPQEATGYSPFELSYGCTFLLGPNLLTDNTYADM 104
>BC033390-1|AAH33390.1| 439|Homo sapiens KRBA2 protein protein.
Length = 439
Score = 36.7 bits (81), Expect = 0.067
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 5/141 (3%)
Frame = +2
Query: 35 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 214
FK+ L D T++ + L +A V + D + G P + +D G +F + +
Sbjct: 225 FKFILYYQDHSTKFIILRPLRTKQAHEVVSVLL-DIFTILGTPSVLDSDSGVEFTNQVVH 283
Query: 215 ELSKLTGSRHISTTAYHPA-ANGLVERFHRQLKAAIMCHSDQN----WYEVIPLILLGIR 379
EL++L I + YHP + G +E R +K I N W + + + +
Sbjct: 284 ELNELWPDLKIVSGKYHPGQSQGSLEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRN 343
Query: 380 NAWKEDIGSSSAELVYGETLK 442
A+ + S E ++G K
Sbjct: 344 QAFDVSLQQSPFEAMFGYKAK 364
>AK131219-1|BAD18406.1| 492|Homo sapiens protein ( Homo sapiens
cDNA FLJ16113 fis, clone 3NB692004724. ).
Length = 492
Score = 36.7 bits (81), Expect = 0.067
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 5/141 (3%)
Frame = +2
Query: 35 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 214
FK+ L D T++ + L +A V + D + G P + +D G +F + +
Sbjct: 278 FKFILYYQDHSTKFIILRPLRTKQAHEVVSVLL-DIFTILGTPSVLDSDSGVEFTNQVVH 336
Query: 215 ELSKLTGSRHISTTAYHPA-ANGLVERFHRQLKAAIMCHSDQN----WYEVIPLILLGIR 379
EL++L I + YHP + G +E R +K I N W + + + +
Sbjct: 337 ELNELWPDLKIVSGKYHPGQSQGSLEGASRDVKNMISTWMQSNHSCHWAKGLRFMQMVRN 396
Query: 380 NAWKEDIGSSSAELVYGETLK 442
A+ + S E ++G K
Sbjct: 397 QAFDVSLQQSPFEAMFGYKAK 417
>BC111742-1|AAI11743.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Frame = +2
Query: 35 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 214
+++ L D T+ + +L+ + VA A + D + G P + +D GR+F S +
Sbjct: 390 YRFILHYQDLCTKLTFLRSLKSKRPTEVAHALL-DIFTIIGAPSVLQSDNGREFSSQVVS 448
Query: 215 ELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIMCHSDQNWYEVIPLILLGIRN 382
ELS + I S T ++ E +++ + + ++ +W E + I +
Sbjct: 449 ELSNIWPELKIVHGKSKTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 508
Query: 383 AWKEDIGSSSAELVYGETLKL 445
+ + + E + KL
Sbjct: 509 PYHRSMQQTPCESAFSSEAKL 529
>BC111741-1|AAI11742.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Frame = +2
Query: 35 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 214
+++ L D T+ + +L+ + VA A + D + G P + +D GR+F S +
Sbjct: 390 YRFILHYQDLCTKLTFLRSLKSKRPTEVAHALL-DIFTIIGAPSVLQSDNGREFSSQVVS 448
Query: 215 ELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIMCHSDQNWYEVIPLILLGIRN 382
ELS + I S T ++ E +++ + + ++ +W E + I +
Sbjct: 449 ELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 508
Query: 383 AWKEDIGSSSAELVYGETLKL 445
+ + + E + KL
Sbjct: 509 PYHRSMQQTPCESAFSSEAKL 529
>BC110834-1|AAI10835.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Frame = +2
Query: 35 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 214
+++ L D T+ + +L+ + VA A + D + G P + +D GR+F S +
Sbjct: 390 YRFILHYQDLCTKLTFLRSLKSKRPTEVAHALL-DIFTIIGAPSVLQSDNGREFSSQVVS 448
Query: 215 ELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIMCHSDQNWYEVIPLILLGIRN 382
ELS + I S T ++ E +++ + + ++ +W E + I +
Sbjct: 449 ELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 508
Query: 383 AWKEDIGSSSAELVYGETLKL 445
+ + + E + KL
Sbjct: 509 PYHRSMQQTPCESAFSSEAKL 529
>AY517631-1|AAS01734.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Frame = +2
Query: 35 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 214
+++ L D T+ + +L+ + VA A + D + G P + +D GR+F S +
Sbjct: 390 YRFILHYQDLCTKLTFLRSLKSKRPTEVAHALL-DIFTIIGAPSVLQSDNGREFSSQVVS 448
Query: 215 ELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIMCHSDQNWYEVIPLILLGIRN 382
ELS + I S T ++ E +++ + + ++ +W E + I +
Sbjct: 449 ELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 508
Query: 383 AWKEDIGSSSAELVYGETLKL 445
+ + + E + KL
Sbjct: 509 PYHRSMQQTPCESAFSSEAKL 529
>AL671879-1|CAI17641.2| 794|Homo sapiens zinc finger protein 452
protein.
Length = 794
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Frame = +2
Query: 35 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 214
+++ L D T+ + +L+ + VA A + D + G P + +D GR+F S +
Sbjct: 390 YRFILHYQDLCTKLTFLRSLKSKRPTEVAHALL-DIFTIIGAPSVLQSDNGREFSSQVVS 448
Query: 215 ELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIMCHSDQNWYEVIPLILLGIRN 382
ELS + I S T ++ E +++ + + ++ +W E + I +
Sbjct: 449 ELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 508
Query: 383 AWKEDIGSSSAELVYGETLKL 445
+ + + E + KL
Sbjct: 509 PYHRSMQQTPCESAFSSEAKL 529
>AK056369-1|BAB71166.1| 782|Homo sapiens protein ( Homo sapiens
cDNA FLJ31807 fis, clone NT2RI2009215, moderately
similar to ZINC FINGER PROTEIN 165. ).
Length = 782
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Frame = +2
Query: 35 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 214
+++ L D T+ + +L+ + VA A + D + G P + +D GR+F S +
Sbjct: 390 YRFILHYQDLCTKLTFLRSLKSKRPTEVAHALL-DIFTIIGAPSVLQSDNGREFSSQVVS 448
Query: 215 ELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIMCHSDQNWYEVIPLILLGIRN 382
ELS + I S T ++ E +++ + + ++ +W E + I +
Sbjct: 449 ELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 508
Query: 383 AWKEDIGSSSAELVYGETLKL 445
+ + + E + KL
Sbjct: 509 PYHRSMQQTPCESAFSSEAKL 529
>AB067512-1|BAB67818.1| 1147|Homo sapiens KIAA1925 protein protein.
Length = 1147
Score = 35.5 bits (78), Expect = 0.16
Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Frame = +2
Query: 35 FKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK 214
+++ L D T+ + +L+ + VA A + D + G P + +D GR+F S +
Sbjct: 212 YRFILHYQDLCTKLTFLRSLKSKRPTEVAHALL-DIFTIIGAPSVLQSDNGREFSSQVVS 270
Query: 215 ELSKLTGSRHI----STTAYHPAANGLVERFHRQLKAAIMCHSDQNWYEVIPLILLGIRN 382
ELS + I S T ++ E +++ + + ++ +W E + I +
Sbjct: 271 ELSNIWPELKIVHGKSQTCQSQSSAEQTEDIRKRIFSWMQTNNSSHWTEFLWFIQMSQNQ 330
Query: 383 AWKEDIGSSSAELVYGETLKL 445
+ + + E + KL
Sbjct: 331 PYHRSMQQTPCESAFSSEAKL 351
>M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenous
retrovirus HERV-K10. ).
Length = 1361
Score = 33.1 bits (72), Expect = 0.83
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 155 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 322
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 604 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 659
>AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein.
Length = 727
Score = 33.1 bits (72), Expect = 0.83
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 155 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 322
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 565 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 620
>AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 33.1 bits (72), Expect = 0.83
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 155 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 322
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 702 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 757
>AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 33.1 bits (72), Expect = 0.83
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 155 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 322
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 702 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 757
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1879
Score = 33.1 bits (72), Expect = 0.83
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 155 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 322
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 1625 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 1680
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1755
Score = 33.1 bits (72), Expect = 0.83
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 155 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 322
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 1627 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 1682
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 33.1 bits (72), Expect = 0.83
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 155 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 322
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 1625 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 1680
>AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 33.1 bits (72), Expect = 0.83
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 155 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 322
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 702 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 757
>AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 33.1 bits (72), Expect = 0.83
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 155 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 322
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 702 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 757
>AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein.
Length = 702
Score = 32.7 bits (71), Expect = 1.1
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 155 GCPQKITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIM 322
G P+KI TD G + S F++ H + Y+ +VER +R LK ++
Sbjct: 592 GVPKKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLV 647
>AK131478-1|BAD18623.1| 266|Homo sapiens protein ( Homo sapiens
cDNA FLJ16646 fis, clone TESTI4032090. ).
Length = 266
Score = 30.7 bits (66), Expect = 4.4
Identities = 22/108 (20%), Positives = 37/108 (34%)
Frame = +2
Query: 17 LPISNGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQF 196
+P Y VD F+ W A + ++ K + G I TD +
Sbjct: 148 VPSFGRLAYVHACVDTFSLWA---ACQSGESSAYVKRHLLQCFVVIGILASIKTDNAPGY 204
Query: 197 ESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIMCHSDQN 340
S + +HI+ Y+ +VER + LK + +N
Sbjct: 205 TSQALATFFSIRNIKHITGIPYNSQGQAIVERMNLSLKQQLQKQKGEN 252
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,298,499
Number of Sequences: 237096
Number of extensions: 1584128
Number of successful extensions: 3075
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 3002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3073
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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