Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0007_O12
(627 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 80 2e-15
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 80 2e-15
AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p pro... 80 2e-15
AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p pro... 79 4e-15
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 69 7e-12
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 68 9e-12
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 66 4e-11
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 66 4e-11
AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p pro... 63 3e-10
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 63 3e-10
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 63 3e-10
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 57 2e-08
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 48 1e-05
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 45 1e-04
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 44 2e-04
AE014135-102|AAF59331.1| 131|Drosophila melanogaster CG11260-PA... 38 0.008
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 35 0.078
X07656-2|CAA30503.1| 982|Drosophila melanogaster protein ( Dros... 34 0.14
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 34 0.18
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 33 0.24
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 32 0.73
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 32 0.73
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 32 0.73
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 32 0.73
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 32 0.73
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 32 0.73
BT001400-1|AAN71155.1| 733|Drosophila melanogaster GH06606p pro... 31 0.97
AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical... 31 0.97
X15707-1|CAA33737.1| 267|Drosophila melanogaster protein ( Dros... 31 1.3
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 31 1.3
AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein ... 31 1.3
AF145629-1|AAD38604.1| 985|Drosophila melanogaster BcDNA.GH0558... 31 1.3
AE013599-714|AAM68837.1| 985|Drosophila melanogaster CG8740-PC,... 31 1.3
AE013599-713|AAM68836.1| 985|Drosophila melanogaster CG8740-PB,... 31 1.3
AE013599-712|AAF59045.1| 985|Drosophila melanogaster CG8740-PA,... 31 1.3
AY113371-1|AAM29376.1| 1237|Drosophila melanogaster LP01827p pro... 30 2.9
AE014298-2399|AAF48606.2| 1342|Drosophila melanogaster CG4301-PA... 30 2.9
AJ279888-1|CAB69645.1| 120|Drosophila melanogaster integrase pr... 28 9.0
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 80.2 bits (189), Expect = 2e-15
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Frame = +2
Query: 2 DIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITT 178
D IGPLP S NG +Y +T + T++ I + + A+TVAKA +I ++G + T
Sbjct: 971 DTIGPLPKSENGNEYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFIT 1030
Query: 179 DRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIMCH--SDQNWYEV 352
D G ++++ + +L K ++I++TA+H G+VER HR L I + +D+ ++V
Sbjct: 1031 DMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYISTDKTDWDV 1090
Query: 353 IPLILLGIRNAWKEDIGS-SSAELVYGETLKLPSDFFLASSVAEVTDYSDF 502
+ N + + + ELV+G T LP F S+ + + D+
Sbjct: 1091 WLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYNIDDY 1141
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent DNA
polymerase protein.
Length = 1000
Score = 80.2 bits (189), Expect = 2e-15
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Frame = +2
Query: 2 DIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITT 178
D IGPLP S NG +Y +T + T++ I + + A+TVAKA +I ++G + T
Sbjct: 734 DTIGPLPKSENGNEYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFIT 793
Query: 179 DRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIMCH--SDQNWYEV 352
D G ++++ + +L K ++I++TA+H G+VER HR L I + +D+ ++V
Sbjct: 794 DMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYISTDKTDWDV 853
Query: 353 IPLILLGIRNAWKEDIGS-SSAELVYGETLKLPSDFFLASSVAEVTDYSDF 502
+ N + + + ELV+G T LP F S+ + + D+
Sbjct: 854 WLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYNIDDY 904
>AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p
protein.
Length = 320
Score = 80.2 bits (189), Expect = 2e-15
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Frame = +2
Query: 2 DIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITT 178
D IGPLP S NG +Y +T + T++ I + + A+TVAKA +I ++G + T
Sbjct: 122 DTIGPLPKSENGNEYAVTLICDLTKYLVAIPIANKSAKTVAKAIFESFILKYGPMKTFIT 181
Query: 179 DRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIMCH--SDQNWYEV 352
D G ++++ + +L K ++I++TA+H G+VER HR L I + +D+ ++V
Sbjct: 182 DMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYISTDKTDWDV 241
Query: 353 IPLILLGIRNAWKEDIGS-SSAELVYGETLKLPSDFFLASSVAEVTDYSDF 502
+ N + + + ELV+G T LP F S+ + + D+
Sbjct: 242 WLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYNIDDY 292
>AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p
protein.
Length = 451
Score = 79.4 bits (187), Expect = 4e-15
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Frame = +2
Query: 2 DIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITT 178
D +GPLP S +G L VDRF++W E++ + ET+ KA ++R+G P+ + T
Sbjct: 168 DFVGPLPRSKHGNSMLLVLVDRFSKWTEIVPMRRATTETMRKAVRERIVARYGVPKVMIT 227
Query: 179 DRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAI--MCHSDQ-NWYE 349
D Q F++ + G RH T Y P N ER +R +K I +DQ W E
Sbjct: 228 DNNVQLTIRAFRKFLEELGVRHQLTAPYTPQENP-TERANRTVKTMIAQFTGADQRTWDE 286
Query: 350 VIPLILLGIRNAWKEDIGSSSAELVYGETLKLPSDFF 460
P + L + + E G S A + G +LP+ F
Sbjct: 287 HWPELQLAVNTSVAETTGYSPAFITQGREPRLPNALF 323
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 68.5 bits (160), Expect = 7e-12
Identities = 34/101 (33%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 DIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITT 178
D IGPLP S NG +Y +T + T++ + + + A++VAKA ++I ++G + I T
Sbjct: 358 DTIGPLPRSENGNEYAVTIICDLTKYLVTVPIPNKSAKSVAKAVFENFILKYGPMKTIIT 417
Query: 179 DRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHR 301
D G ++++ + +L K ++I++TA+H G +ER HR
Sbjct: 418 DMGTEYKNQIIDDLCKYMKIKNITSTAHHHQTLGTIERSHR 458
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 68.1 bits (159), Expect = 9e-12
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Frame = +2
Query: 2 DIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITT 178
D +GP+ S +KY L VD F+++ + + E V K + DW + FG P++I +
Sbjct: 1044 DHLGPMDSSAKQYKYILATVDAFSKFVWLFPTKSTGQEEVVKR-LTDWSNIFGFPKRIVS 1102
Query: 179 DRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAI-MCHSDQ--NWYE 349
D+G F S F++ H+ TT NG +ER +R + A I SD+ WY+
Sbjct: 1103 DKGTAFTSGAFEQFMSSHNVEHVCTTTGVARGNGQIERVNRLILAIISKLSSDEPSKWYK 1162
Query: 350 VIPLILLGIRNAWKEDIGSSSAELVYG 430
+P + I + S E+++G
Sbjct: 1163 YVPEVQKAINCHVHSSLKLSPFEVMFG 1189
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 66.1 bits (154), Expect = 4e-11
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 4/176 (2%)
Frame = +2
Query: 2 DIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITT 178
D IGPLP S +G +Y +T + T++ I + A+TVAKA ++ ++G + T
Sbjct: 729 DTIGPLPKSEDGNEYAVTIICDLTKFLVTIPTPNKSAKTVAKAIFELFVLKYGPMKTFIT 788
Query: 179 DRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIMCHSDQN---WYE 349
D+G ++++ L EL K +++++A+H G +ER HR I + N W
Sbjct: 789 DQGTEYKNSLMNELCKYMHIENLTSSAHHHQTLGTIERSHRTFNEYIRSYISVNKSDWDI 848
Query: 350 VIPLILLGIRNAWKEDIGSSSAELVYGETLKLPSDFFLASSVAEVTDYSDFLSRLR 517
+P ELV+G + DF + + + + D+ L+
Sbjct: 849 WLPYFTYCFNTTPSIVHDYCPYELVFGRLPRQFKDFSKINKIDPIYNLDDYSKELK 904
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
Length = 1026
Score = 66.1 bits (154), Expect = 4e-11
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Frame = +2
Query: 2 DIIGPLPIS-NGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITT 178
D +GP+ S +KY L VD F+++ + + E V K + DW + FG P++I +
Sbjct: 737 DHLGPMDSSAKQYKYILATVDAFSKFVWLFPTKSTGQEEVVKR-LTDWSNIFGFPKRIVS 795
Query: 179 DRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAI-MCHSDQ--NWYE 349
D+G F S F++ H+ TT NG +ER +R A I SD+ WY+
Sbjct: 796 DKGTAFTSGAFEQFMSSHNVEHVCTTTGVARGNGQIERVNRLNLAIISKLSSDEPSKWYK 855
Query: 350 VIPLILLGIRNAWKEDIGSSSAELVYG 430
+P + I + S E+++G
Sbjct: 856 YVPEVQKAINCHVHSSLKLSPFEVMFG 882
>AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p
protein.
Length = 370
Score = 63.3 bits (147), Expect = 3e-10
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 DIIGPLPISN-GFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITT 178
D +GPLP S G +Y +T + T++ I + + A TVAKA ++I ++G + +
Sbjct: 104 DTVGPLPKSEYGNEYIVTLICDLTKYLVTIPVANKSANTVAKAIFENFILKYGPMKTFIS 163
Query: 179 DRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHR 301
D G ++++ + +++ K ++++TAYH G +ER HR
Sbjct: 164 DMGTEYKNNVIQDMCKYMKIENLTSTAYHHQTLGTIERSHR 204
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 63.3 bits (147), Expect = 3e-10
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 DIIGPLPISN-GFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITT 178
D +GPLP S G +Y +T + T++ I + + A TVAKA ++I ++G + +
Sbjct: 560 DTVGPLPKSEYGNEYIVTLICDLTKYLVTIPVANKSANTVAKAIFENFILKYGPMKTFIS 619
Query: 179 DRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHR 301
D G ++++ + +++ K ++++TAYH G +ER HR
Sbjct: 620 DMGTEYKNNVIQDMCKYMKIENLTSTAYHHQTLGTIERSHR 660
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 63.3 bits (147), Expect = 3e-10
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +2
Query: 2 DIIGPLPISN-GFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITT 178
D +GPLP S G +Y +T + T++ I + + A TVAKA ++I ++G + +
Sbjct: 560 DTVGPLPKSEYGNEYIVTLICDLTKYLVTIPVANKSANTVAKAIFENFILKYGPMKTFIS 619
Query: 179 DRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHR 301
D G ++++ + +++ K ++++TAYH G +ER HR
Sbjct: 620 DMGTEYKNNVIQDMCKYMKIENLTSTAYHHQTLGTIERSHR 660
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 56.8 bits (131), Expect = 2e-08
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Frame = +2
Query: 2 DIIGPLPISNGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTD 181
D GP+ ++ K+ L VD FT++ + A + + V ++ + D+ + P+ I +D
Sbjct: 1274 DHYGPVDLARPKKHILVIVDAFTKFVRLYATKTTNTKEVIQS-LNDYFRAYSRPKCIISD 1332
Query: 182 RGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAI--MCHSDQ--NWYE 349
RG F S F K +HI P ANG VER +R L I + DQ +W
Sbjct: 1333 RGACFTSGDFDSFLKECNVKHIKIATGSPQANGQVERINRSLGPMISKLIEPDQGLHWDL 1392
Query: 350 VIPLILLGIRNAWKEDIGSSSAELVYG 430
V+ + + N I + +++G
Sbjct: 1393 VLEKVEYTLNNTLHRSIKQYPSIMLFG 1419
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Frame = +2
Query: 41 YCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLF-KE 217
Y LT +D+F+++ + + V KA ++ +IS+FG P+K+ D+G +F S +F K
Sbjct: 830 YNLTIIDKFSKFAAAYPITNRNCINVVKA-LKHFISQFGIPKKLIYDQGAEFASDMFNKF 888
Query: 218 LSKLTGSRHISTTAYHPAANGLVERFHRQL 307
++ H+ T+ ++N VER H L
Sbjct: 889 CTQFNIDLHV-TSFQQSSSNSPVERLHSTL 917
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 44.8 bits (101), Expect = 1e-04
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +2
Query: 23 ISNGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFES 202
I+N F LT +D+F+++ V + + KA I+++ S+FG P+K+ D+G +F +
Sbjct: 937 INNNFN--LTIIDKFSKFAAVYPIPNRNGINCIKA-IKNFFSQFGLPKKLIHDQGVEFCN 993
Query: 203 YLFKEL-SKLTGSRHISTTAYHPAANGLVERFHRQL 307
+F++ S+ H+ T+ ++N VER H L
Sbjct: 994 DIFRKFCSQYNILLHV-TSFQQSSSNSPVERLHSSL 1028
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 44.0 bits (99), Expect = 2e-04
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +2
Query: 47 LTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFK-ELS 223
LTA+D+F++ ++ E + KA +RD + +G P+ I D + S K L+
Sbjct: 836 LTAIDKFSKLAMGRVIKSKAVEDIRKA-LRDIVFYYGVPKLIVMDNEKSLNSASIKFMLT 894
Query: 224 KLTGSRHISTTAYHPAANGLVERFHRQLKAAIMC 325
G Y NG +ERFH L + C
Sbjct: 895 DQLGIELYKAPPYKSTVNGQIERFHSTLSEIMRC 928
>AE014135-102|AAF59331.1| 131|Drosophila melanogaster CG11260-PA
protein.
Length = 131
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/75 (32%), Positives = 34/75 (45%)
Frame = +2
Query: 56 VDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFKELSKLTG 235
VD F+++ E V R ++ FG P +I +DRG F S+LFKE +
Sbjct: 20 VDAFSKYVWFYPTRSTGVEEVLNCIERQALN-FGKPFRIVSDRGAAFTSHLFKEYYEKHQ 78
Query: 236 SRHISTTAYHPAANG 280
RH+ P NG
Sbjct: 79 IRHLLIPTGVPLGNG 93
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 35.1 bits (77), Expect = 0.078
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Frame = +2
Query: 26 SNGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESY 205
S G Y LT +D+F+++ V + + T + I ++ F + I D S
Sbjct: 822 STGRNYFLTCIDKFSKFAIVQPIGS-RTITDLEPAIMQLMNFFPHSKTIFCDNEPSINSE 880
Query: 206 LFKELSKLTGSRHISTTA-YHPAANGLVERFHRQLKAAIMC-HSDQNWYEVIPLIL 367
K L K + I+ H +NG VERFH L C D + + LIL
Sbjct: 881 SIKSLLKNRFNVDIANAPPLHSTSNGQVERFHSTLLEIARCLKLDSGMNDTVNLIL 936
>X07656-2|CAA30503.1| 982|Drosophila melanogaster protein (
Drosophila melanogasterretrotransposon 1731 sequence. ).
Length = 982
Score = 34.3 bits (75), Expect = 0.14
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Frame = +2
Query: 2 DIIGPL--PISNGFKYCLTAVDRFTRWPEVIALEDIKAETVAKAFI--RDWISR-FGCPQ 166
D+ GP P G KY LT +D +R V L K + V F+ + + R G
Sbjct: 205 DLCGPFSTPSLAGSKYFLTFIDDKSRRIFVYFLR--KKDEVFTKFVEFKKLVERQTGRKI 262
Query: 167 K-ITTDRGRQFESYLFKELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIMC 325
K I +D G +F + +F + K G T + P NG+ ER +R L C
Sbjct: 263 KCIRSDNGGEFVNNVFDDYLKAHGIARQLTIPHTPQQNGVAERANRTLVEMARC 316
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed DNA
polymerase protein.
Length = 1013
Score = 33.9 bits (74), Expect = 0.18
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Frame = +2
Query: 38 KYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESY-LFK 214
KY LT VD+F+++ V + E + KA + ++ F + I D +S +
Sbjct: 798 KYFLTCVDKFSKFAMVQPILSRTIEDL-KAPLLQLMNVFPKAKTIYCDNEPSLKSQTIVA 856
Query: 215 ELSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIMC-HSDQNWYEVIPLILL 370
L G + H +NG VERFH L C D+ + + L+LL
Sbjct: 857 MLENHFGVSISNAPPLHSVSNGQVERFHSTLIELARCLKIDKGISDTVELVLL 909
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 33.5 bits (73), Expect = 0.24
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +2
Query: 38 KYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYLF 211
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 800 KLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETV 856
Query: 212 KELSKLT-GSRHISTTAYHPAANGLVERFHRQLKAAIMC-HSDQNWYEVIPLIL 367
+ K T G ++ H ++NG VERFH L C D+ + + LIL
Sbjct: 857 TSMLKNTFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDKKTSDTVELIL 910
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 31.9 bits (69), Expect = 0.73
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +2
Query: 38 KYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYLF 211
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 795 KLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETV 851
Query: 212 KELSKLT-GSRHISTTAYHPAANGLVERFHRQLKAAIMC-HSDQNWYEVIPLIL 367
+ K + G ++ H ++NG VERFH L C D+ + + LIL
Sbjct: 852 TSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDKKTNDTVELIL 905
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 31.9 bits (69), Expect = 0.73
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +2
Query: 38 KYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYLF 211
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 830 KLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETV 886
Query: 212 KELSKLT-GSRHISTTAYHPAANGLVERFHRQLKAAIMC-HSDQNWYEVIPLIL 367
+ K + G ++ H ++NG VERFH L C D+ + + LIL
Sbjct: 887 TSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDKKTNDTVELIL 940
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 31.9 bits (69), Expect = 0.73
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +2
Query: 38 KYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYLF 211
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 830 KLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETV 886
Query: 212 KELSKLT-GSRHISTTAYHPAANGLVERFHRQLKAAIMC-HSDQNWYEVIPLIL 367
+ K + G ++ H ++NG VERFH L C D+ + + LIL
Sbjct: 887 TSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIASCLKLDKKTNDTVELIL 940
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 31.9 bits (69), Expect = 0.73
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +2
Query: 38 KYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYLF 211
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 795 KLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETV 851
Query: 212 KELSKLT-GSRHISTTAYHPAANGLVERFHRQLKAAIMC-HSDQNWYEVIPLIL 367
+ K + G ++ H ++NG VERFH L C D+ + + LIL
Sbjct: 852 TSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDKKTNDTVELIL 905
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 31.9 bits (69), Expect = 0.73
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +2
Query: 38 KYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYLF 211
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 795 KLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETV 851
Query: 212 KELSKLT-GSRHISTTAYHPAANGLVERFHRQLKAAIMC-HSDQNWYEVIPLIL 367
+ K + G ++ H ++NG VERFH L C D+ + + LIL
Sbjct: 852 TSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDKKTNDTVELIL 905
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 31.9 bits (69), Expect = 0.73
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 4/114 (3%)
Frame = +2
Query: 38 KYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYLF 211
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 1248 KLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETV 1304
Query: 212 KELSKLT-GSRHISTTAYHPAANGLVERFHRQLKAAIMC-HSDQNWYEVIPLIL 367
+ K + G ++ H ++NG VERFH L C D+ + + LIL
Sbjct: 1305 TSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIARCLKLDKKTNDTVELIL 1358
>BT001400-1|AAN71155.1| 733|Drosophila melanogaster GH06606p
protein.
Length = 733
Score = 31.5 bits (68), Expect = 0.97
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 98 DIKAETVAKAFIRDWISRFGCPQKITTDRGRQF 196
D+ E AF R +++R GCPQ++ +D G+ F
Sbjct: 471 DLTTEKFLAAFAR-FVARRGCPQRVHSDNGKTF 502
>AJ487856-1|CAD32253.1| 1830|Drosophila melanogaster hypothetical
protein protein.
Length = 1830
Score = 31.5 bits (68), Expect = 0.97
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 98 DIKAETVAKAFIRDWISRFGCPQKITTDRGRQF 196
D+ E AF R +++R GCPQ++ +D G+ F
Sbjct: 1568 DLTTEKFLAAFAR-FVARRGCPQRVHSDNGKTF 1599
>X15707-1|CAA33737.1| 267|Drosophila melanogaster protein (
Drosophila melanogasterDNA sequence (isolate CBS) for
18S rRNA (3'end), 5.8SrRNA and 28S rRNA (5'end). ).
Length = 267
Score = 31.1 bits (67), Expect = 1.3
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Frame = +2
Query: 38 KYCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQFESYLFKE 217
KY LT +D+F+++ + E + A ++ ++ F + + D S+
Sbjct: 76 KYFLTCIDKFSKFAIEQHVHSRTIEDLKPAILQI-MNFFPRARVVYCDNEPSLNSHTIST 134
Query: 218 -LSKLTGSRHISTTAYHPAANGLVERFHRQLKAAIMC-HSDQNWYEVIPLILL 370
L G + H +NG VERFH L C D+ + + +ILL
Sbjct: 135 MLDNHFGVSIANAPPLHSVSNGQVERFHSTLLELARCLKIDKGITDTVEIILL 187
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 31.1 bits (67), Expect = 1.3
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 386 WKEDIGSSSAELVYGETLKLPSDFFLASSVAEVT-DYSDFLSRLRRYMCNLKPTTVIRHG 562
W D+ + + T + A + +++ D+S L LRRY N+KP T +
Sbjct: 179 WPSDLNKLPDLIDFAVTKNISRSLVKAECLPDLSSDHSPVLIHLRRYAENVKPPTRLTSS 238
Query: 563 KSNIFVHK 586
K+N +K
Sbjct: 239 KTNWLRYK 246
>AJ010298-1|CAA09069.1| 1571|Drosophila melanogaster polyprotein
protein.
Length = 1571
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 41 YCLTAVDRFTRWPEVIALEDIKAETVAKAFIRDWISRFGCPQKITTDRGRQF 196
Y L V T+ + D+ E AF R ++SR GCP+++ +D G+ F
Sbjct: 1442 YVLVFVCFSTKAIHLEPTSDLTTEKFLAAFSR-FVSRRGCPRQVQSDNGKTF 1492
>AF145629-1|AAD38604.1| 985|Drosophila melanogaster BcDNA.GH05582
protein.
Length = 985
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +2
Query: 11 GPLPISNGFKYCLTAVDRFTRWPEVIALEDIKA-ETVAKAFIRDWISRFGCPQKITTDRG 187
G I N F+ D TRW + L+DI+A E+ + RD + ++ R
Sbjct: 346 GDSGIENDFRKESFNGDLTTRWRKRTVLDDIRACESFLRKERRDSAQQRQFQRQAVPSRL 405
Query: 188 RQFESYLFKELSKLTGSRHISTTAYHPAANGLVER 292
R+ SY+++E S GS +P A + R
Sbjct: 406 RREHSYVYRERSIDDGSHFDPHLDKYPVATSTLRR 440
>AE013599-714|AAM68837.1| 985|Drosophila melanogaster CG8740-PC,
isoform C protein.
Length = 985
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +2
Query: 11 GPLPISNGFKYCLTAVDRFTRWPEVIALEDIKA-ETVAKAFIRDWISRFGCPQKITTDRG 187
G I N F+ D TRW + L+DI+A E+ + RD + ++ R
Sbjct: 346 GDSGIENDFRKESFNGDLTTRWRKRTVLDDIRACESFLRKERRDSAQQRQFQRQAVPSRL 405
Query: 188 RQFESYLFKELSKLTGSRHISTTAYHPAANGLVER 292
R+ SY+++E S GS +P A + R
Sbjct: 406 RREHSYVYRERSIDDGSHFDPHLDKYPVATSTLRR 440
>AE013599-713|AAM68836.1| 985|Drosophila melanogaster CG8740-PB,
isoform B protein.
Length = 985
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +2
Query: 11 GPLPISNGFKYCLTAVDRFTRWPEVIALEDIKA-ETVAKAFIRDWISRFGCPQKITTDRG 187
G I N F+ D TRW + L+DI+A E+ + RD + ++ R
Sbjct: 346 GDSGIENDFRKESFNGDLTTRWRKRTVLDDIRACESFLRKERRDSAQQRQFQRQAVPSRL 405
Query: 188 RQFESYLFKELSKLTGSRHISTTAYHPAANGLVER 292
R+ SY+++E S GS +P A + R
Sbjct: 406 RREHSYVYRERSIDDGSHFDPHLDKYPVATSTLRR 440
>AE013599-712|AAF59045.1| 985|Drosophila melanogaster CG8740-PA,
isoform A protein.
Length = 985
Score = 31.1 bits (67), Expect = 1.3
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +2
Query: 11 GPLPISNGFKYCLTAVDRFTRWPEVIALEDIKA-ETVAKAFIRDWISRFGCPQKITTDRG 187
G I N F+ D TRW + L+DI+A E+ + RD + ++ R
Sbjct: 346 GDSGIENDFRKESFNGDLTTRWRKRTVLDDIRACESFLRKERRDSAQQRQFQRQAVPSRL 405
Query: 188 RQFESYLFKELSKLTGSRHISTTAYHPAANGLVER 292
R+ SY+++E S GS +P A + R
Sbjct: 406 RREHSYVYRERSIDDGSHFDPHLDKYPVATSTLRR 440
>AY113371-1|AAM29376.1| 1237|Drosophila melanogaster LP01827p
protein.
Length = 1237
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +2
Query: 434 TLKLPSDFFLASSVAEVTDYSDFLSRLRRYMCNLKPTTVIRHGKSNIFVHKDLQKSSQVF 613
T LP F +A + A+ Y D L + N P TVIR GK I +D+ +
Sbjct: 16 TSLLPLVFVIAVTAAK-QGYEDILRYRTDNVVNSSPVTVIRDGKEAIIKSQDVIPGELIV 74
Query: 614 LRTD 625
+ D
Sbjct: 75 VERD 78
>AE014298-2399|AAF48606.2| 1342|Drosophila melanogaster CG4301-PA
protein.
Length = 1342
Score = 29.9 bits (64), Expect = 2.9
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +2
Query: 434 TLKLPSDFFLASSVAEVTDYSDFLSRLRRYMCNLKPTTVIRHGKSNIFVHKDLQKSSQVF 613
T LP F +A + A+ Y D L + N P TVIR GK I +D+ +
Sbjct: 121 TSLLPLVFVIAVTAAK-QGYEDILRYRTDNVVNSSPVTVIRDGKEAIIKSQDVIPGELIV 179
Query: 614 LRTD 625
+ D
Sbjct: 180 VERD 183
>AJ279888-1|CAB69645.1| 120|Drosophila melanogaster integrase
protein.
Length = 120
Score = 28.3 bits (60), Expect = 9.0
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Frame = +2
Query: 38 KYCLTAVDRFTRWPEVIALEDIKAETVAK--AFIRDWISRFGCPQKITTDRGRQFESYLF 211
K LT +D+F+++ V + + + T+ A + I+ F + + D F S
Sbjct: 27 KLFLTCIDKFSKYAIV---QPVVSRTIVDITAPLLQIINLFPNIKTVYCDNEPAFNSETV 83
Query: 212 KELSKLT-GSRHISTTAYHPAANGLVERFHRQL 307
+ K + G ++ H ++NG VERFH L
Sbjct: 84 TSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTL 116
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,761,146
Number of Sequences: 53049
Number of extensions: 487674
Number of successful extensions: 1100
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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