Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0007_O11
         (54 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    19   4.0  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    19   5.3  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      19   5.3  
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    18   9.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    18   9.2  

>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 19.4 bits (38), Expect = 4.0
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 39  YHYNNMCRLL 10
           Y+YNN C+ L
Sbjct: 98  YNYNNNCKKL 107


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
          preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 19.0 bits (37), Expect = 5.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 10 QKSTHIIIMILFYF 51
          + +TH+I ++LF F
Sbjct: 6  KNATHLITVLLFSF 19


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 19.0 bits (37), Expect = 5.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 10 QKSTHIIIMILFYF 51
          + +TH+I ++LF F
Sbjct: 6  KNATHLITVLLFSF 19


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
          protein.
          Length = 85

 Score = 18.2 bits (35), Expect = 9.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 19 THIIIMILFY 48
          +HIII+ LFY
Sbjct: 55 SHIIIVGLFY 64


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 18.2 bits (35), Expect = 9.2
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 24  YYYNDIIL 47
           Y YND+IL
Sbjct: 455 YQYNDLIL 462


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,915
Number of Sequences: 438
Number of extensions: 40
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 0
effective length of database: 146,343
effective search space used:  2487831
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)